Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3474 |
Symbol | |
ID | 5193650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3880701 |
End bp | 3880973 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587926 |
Product | small integral membrane protein-like protein |
Protein accession | YP_001268784 |
Protein GI | 148548682 |
COG category | [S] Function unknown |
COG ID | [COG5477] Predicted small integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00603331 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAGTGGA TGGCCTGGAC CCTGCCGACA GCGCTGTTCT TCGCCGCTGT GGGCCTGTTG CTGCTGGGCA TGACATTGCT TGAACTGCGT CGCCCCTGCG TAGAGCGACG GGGCTTTTTG CCGCTGGTCA CCAGCCGTGG TGACCGTTTG TTCATCGGCC TGCTGGCCAG CGCCTACCTG CACCTGCTGG TGGTCGGTGT CAGCGACTGG CCATTGTGGG TGGCCTCGCT GCTGTCGCTG GCGTGGCTGG CGGTGGTGTT GCGCTGGGGC TGA
|
Protein sequence | MEWMAWTLPT ALFFAAVGLL LLGMTLLELR RPCVERRGFL PLVTSRGDRL FIGLLASAYL HLLVVGVSDW PLWVASLLSL AWLAVVLRWG
|
| |