Gene Pput_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3474 
Symbol 
ID5193650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3880701 
End bp3880973 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content66% 
IMG OID640587926 
Productsmall integral membrane protein-like protein 
Protein accessionYP_001268784 
Protein GI148548682 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00603331 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTGGA TGGCCTGGAC CCTGCCGACA GCGCTGTTCT TCGCCGCTGT GGGCCTGTTG 
CTGCTGGGCA TGACATTGCT TGAACTGCGT CGCCCCTGCG TAGAGCGACG GGGCTTTTTG
CCGCTGGTCA CCAGCCGTGG TGACCGTTTG TTCATCGGCC TGCTGGCCAG CGCCTACCTG
CACCTGCTGG TGGTCGGTGT CAGCGACTGG CCATTGTGGG TGGCCTCGCT GCTGTCGCTG
GCGTGGCTGG CGGTGGTGTT GCGCTGGGGC TGA
 
Protein sequence
MEWMAWTLPT ALFFAAVGLL LLGMTLLELR RPCVERRGFL PLVTSRGDRL FIGLLASAYL 
HLLVVGVSDW PLWVASLLSL AWLAVVLRWG