| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3470 |
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| Symbol | tig |
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| ID | 5190398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3875162 |
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| End bp | 3876475 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640587918 |
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| Product | trigger factor |
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| Protein accession | YP_001268780 |
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| Protein GI | 148548678 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000745697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAA CACTTCCGCT CTCGAGCGCC GCATGACCAT CGCCGTTCCG
GCCGAGCGCG TCGAGAACGA AGTCAACAAG CGTCTGCAGC AGACTGCCAA GCGCGCCAAA
ATTGCGGGCT TCCGTCCTGG TAAAGTACCG ATGACCGTGA TCCGTCAGCG TTTCGAGGCG
GACGCCCGTC AAGAGGCTTT CGGTGACCTG GTCCAGGCTT CCTTCTACGA AGCCATCGTC
GAGCAGAAGC TGAACCCGGC TGGCGCCCCG GCTGTAGAGC CCAAGTCCTT CGAAAAGGGC
AAGGATCTGG AGTTCGTCGC CATCTTCGAA GTGTTCCCTG AGTTCACTGT TGCGGGCCTC
GAGTCGATCA AGGTCGAGCG CCTGAGCGCC GAAGTGGCTG ACAGCGACCT GGACAACATG
CTGGAAGTGC TGCGCAAGCA GAACACCCGC TTCGAGGCCG TCGAGCGCGC TGCGCAGAAT
GACGACCAGG TCAACATCGA CTTCGTCGGC AAGGTCGACG GTGAAGCGTT TGCCGGTGGT
TCGGCCAAGG GCACCCTGCT GGTGCTGGGC TCCGGCCGCA TGATCCCAGG CTTCGAAGAG
GGCCTGGTAG GCGCCAAGGC TGGCGAAGAG CGCGTTGTCA ACGTGACCTT CCCAGAGGAC
TATCAGAACC TGGACCTGGC TGGCAAAGCC GCCGAGTTCA CCATCACCGT CAACAGCGTT
TCGGCACCTG TACTGCCAGA ACTGAACGAA GCGTTCTTCG CCCAGTTCGG CATCAAGGAA
TCGACGCTGG AAGGCTTCCG CGCCGAAGTT CGCAAGAACA TGGAGCGTGA GCTGCGTCAG
GCGATCAAGA CCAAGGTCAA GAACCAGGTC ATGGACGGTC TGCTGGCCGC CAACCCGATC
GAAGTGCCAA AGGCCCTGCT GGAAAACGAA GTCAACCGTC TGCGCGTGCA GGCTGTTCAG
CAGTTTGGTG GCAACATCAA GCCTGAGCAG CTGCCAGTCG AACTGTTCGA AGAGCAAGCC
AAGCGCCGCG TCGTGCTGGG CCTGATCGTT GCCGAAGTGG TCAAGCAGTT CGAGCTGAAG
CCGGACGACG CCAAGGTTCG CGAGATGATC GAAGAAATGG CTTCGGCTTA CCAAGAGCCT
GAGCAGGTCA TCGCCTGGTA CTACAAGAAC GACCAGCAAC TGAACGAAGT GCGTTCGGTT
GTGCTGGAAG AACAAGTTGT AGATACTGTT CTGCAGAAAG CGACTGTGAC CGACAAATCG
GTCTCGTACG AAGAAGCCGT CAAACCAGCC GAGGCGCCTG CCGCTGCTGA GTAA
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| Protein sequence | MQVSVENTSA LERRMTIAVP AERVENEVNK RLQQTAKRAK IAGFRPGKVP MTVIRQRFEA
DARQEAFGDL VQASFYEAIV EQKLNPAGAP AVEPKSFEKG KDLEFVAIFE VFPEFTVAGL
ESIKVERLSA EVADSDLDNM LEVLRKQNTR FEAVERAAQN DDQVNIDFVG KVDGEAFAGG
SAKGTLLVLG SGRMIPGFEE GLVGAKAGEE RVVNVTFPED YQNLDLAGKA AEFTITVNSV
SAPVLPELNE AFFAQFGIKE STLEGFRAEV RKNMERELRQ AIKTKVKNQV MDGLLAANPI
EVPKALLENE VNRLRVQAVQ QFGGNIKPEQ LPVELFEEQA KRRVVLGLIV AEVVKQFELK
PDDAKVREMI EEMASAYQEP EQVIAWYYKN DQQLNEVRSV VLEEQVVDTV LQKATVTDKS
VSYEEAVKPA EAPAAAE
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