| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3469 |
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| Symbol | clpP |
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| ID | 5190397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3874429 |
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| End bp | 3875070 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587917 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001268779 |
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| Protein GI | 148548677 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00138943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCGCA ATTCTTATAT TCAGCAGAGC TCTGACATCC AGGCCGCAGG CGGCCTGGTC
CCGATGGTTA TCGAGCAGTC CGCCCGTGGC GAACGCGCTT ACGACATCTA CTCGCGCCTG
TTGAAGGAGC GAGTGATCTT CCTGGTTGGC CCGGTAGAGG ACTACATGGC CAACCTCGTC
GTTGCGCAAC TGCTGTTCCT TGAGGCGGAA AACCCGGACA AGGATATCCA TCTGTACATC
AACTCGCCGG GCGGTTCCGT CACCGCCGGC ATGTCGATCT ACGACACCAT GCAGTTCATC
AAGCCGGACG TTTCGACCAT CTGCATCGGC CAGGCCTGCA GCATGGGCGC CTTCCTGCTG
GCGGCAGGTG CCAAGGGCAA GCGTCATTGC CTGCCTAACT CGCGCGTGAT GATCCACCAG
CCGCTGGGCG GCTTCCAGGG TCAGGCCACC GATATCGAGA TCCACGCCCA GGAAATCCTC
AATATCAAGG CCCGTCTGAA CGAGCTGCTG GCCTATCACA CCGGCCAGGA TCTCGAAACC
ATCAAGCGTG ACACCGAGCG TGACAACTTC ATGAGCGCCT CGCGCGCAGC CGAGTACGGC
CTGATCGACT CGGTCTATGA CAAGCGGCAA CTGGCCTCCT GA
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| Protein sequence | MSRNSYIQQS SDIQAAGGLV PMVIEQSARG ERAYDIYSRL LKERVIFLVG PVEDYMANLV
VAQLLFLEAE NPDKDIHLYI NSPGGSVTAG MSIYDTMQFI KPDVSTICIG QACSMGAFLL
AAGAKGKRHC LPNSRVMIHQ PLGGFQGQAT DIEIHAQEIL NIKARLNELL AYHTGQDLET
IKRDTERDNF MSASRAAEYG LIDSVYDKRQ LAS
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