Gene Pput_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3410 
Symbol 
ID5191786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3819358 
End bp3820089 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID640587858 
Producthypothetical protein 
Protein accessionYP_001268720 
Protein GI148548618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTA CCAACATGAG CATCTGGGAG AAGGTCCAAA CGACCGACAC CCGATTCACC 
AAGGACGCCA AGGTCGGCGG CCAGCAGATC ACTAGCCTGA ACGGCACCGC GATGATCATG
AAGGCCACCG AGGTTTTCGG TCCGGCTGGC ATCGGCTTTG GCTGGAACGT GGTTGAAGAG
CGCTTCGACA AGGGCGCCGA GATGTTCAGC GGCGAAGGCG ATAAGCGCAT CAGCCTCGGC
TTCGAACTGA ACCACACGAT CAAGATCAAG TTCTGGTTCG TTCTGGATGG CCAGCGCGGC
GAGATCGAGC AGTACGGCTG CACGCAGTAT CTCTACAAGT CGAAGTACGG CACCACCACC
GACGGCGAGG CGCCGAAGAA GTCGCTGACC GATGCCATCA AGAAGGCCCT GTCCATGCTC
GGCTTCAGCG CTGACGTGTT CCTTGGCATG TTCGACGATG TGAACTACGT GCAGCAGCTG
CAGGCCGAGC AGGCGATCGA GCAGGCCGAA GACCGCCAGG CCGAGATTGA ACGCCAGCAA
CAGGAGCGCC TGGACTTCAT CAAGGAAACG ATCGAGACCA TGCAGAAGGC GGTAACGCCG
CATGAACGCA AGAAAATCCA CGACCATGCC GTGCGCAAGC TCATCGGCCG CAAGGACGAG
AAAGGAGCCG CACGAATCTC GCTTGAACTG AAGAAACTCG AAGCCGGGAA TCCGCAGGAG
GCTGCAGCAT GA
 
Protein sequence
MSTTNMSIWE KVQTTDTRFT KDAKVGGQQI TSLNGTAMIM KATEVFGPAG IGFGWNVVEE 
RFDKGAEMFS GEGDKRISLG FELNHTIKIK FWFVLDGQRG EIEQYGCTQY LYKSKYGTTT
DGEAPKKSLT DAIKKALSML GFSADVFLGM FDDVNYVQQL QAEQAIEQAE DRQAEIERQQ
QERLDFIKET IETMQKAVTP HERKKIHDHA VRKLIGRKDE KGAARISLEL KKLEAGNPQE
AAA