Gene Pput_3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3394 
Symbol 
ID5191869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3811043 
End bp3811819 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID640587842 
Producthypothetical protein 
Protein accessionYP_001268704 
Protein GI148548602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000160878 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCC GCATTCGCAC TATCAAGCCT GAATTCTGGT CGAGCGAGCA GGTTATGTCC 
TGCCGACCGC TCGCTAGGCT CCTGTTCATC GGCCTTTGGA ACTTCTGCGA TGACGGAGGT
AATCACCCGC TGGCCGCGCG CACGATCAAG GCCCTGGTGT TCCCCGGTGA CGACATAACC
ACGGAGGAGG TAAGCGCGCT CCTTGGCGAA CTGGAAGGGG CCGAGCTGAC CCGCAGCTAC
TGGGCAGCAG GCAAGAACTA TCTGCACATC TGCGGCTGGA AGCACCAGAA GATCGAGAAA
AAGAACTTCA AATACCCAGC TCCTCCCGCA GAAATCGAAG ATGGGTCGGA GAGTGGTCGT
CGACAATTCG CCGAGGAGTC GCCGACTGGT CGCCGACCGG TTGACCCCGG AAGGGAAGGG
AATGGAAGGG AAGAACACAA CACTCAACGC GCGGGCGAGG AATCCGGCGT TGACCCAAAG
CTGCCGACCG AGATGGACCT TGAGTGGAAG CCTGACGACA AGCTGCTGAA AGCCTACGCA
AAGCGCATGG GTATCCCTGT CGACCTGTTC ACCGATGAAG CGACCGCCGC ATTCGTTTGC
CACTACTCGG CATCCGGGCG CTGTGAGACC CAGGCCTCGT GGGTGAGCCT GTTGGTCAAG
TGGGTGAAGC GTGACATGGC CACCGCCAGT AATGTTCGGC CATTCCCAGT GAAGCGTCAG
GCCAATGGCC CGGACTTCAG CGACACGTCA TGGGCTGACG ACTTGGGTGA CCTATGA
 
Protein sequence
MMARIRTIKP EFWSSEQVMS CRPLARLLFI GLWNFCDDGG NHPLAARTIK ALVFPGDDIT 
TEEVSALLGE LEGAELTRSY WAAGKNYLHI CGWKHQKIEK KNFKYPAPPA EIEDGSESGR
RQFAEESPTG RRPVDPGREG NGREEHNTQR AGEESGVDPK LPTEMDLEWK PDDKLLKAYA
KRMGIPVDLF TDEATAAFVC HYSASGRCET QASWVSLLVK WVKRDMATAS NVRPFPVKRQ
ANGPDFSDTS WADDLGDL