Gene Pput_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3315 
Symbol 
ID5194795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3731131 
End bp3731613 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID640587762 
Producthypothetical protein 
Protein accessionYP_001268625 
Protein GI148548523 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.186593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGC AACCGATCAA ACGCGGTTTG GCTGCCCTGG TACTGATGGG GCTGGCCCTG 
CCGGCCCTGG CCCAGACCAC CGTGAGTGAT GCCTGGGTGC GTGCCAGCGT GCCGCATCAG
CAGTCCACCG GTGCGTTCAT GGTCCTGACT GCCAGCAGCG ACAGCAAGCT GGTGGGTGTG
GCTTCGCCCG TGGCCAAGAC CGTGCAGGTG CACGAGATGA CCATGAACGG TGACGTGATG
GGCATGCGTG AGGTCAAGGC TGTCGAATTG CCAGCCGGCA AGGCAGTGAC CCTGGACCCG
AATGGCCTGC ATGTCATGCT GATGGGCCTG AACAATCAGG TGAAGGAGGG TGACAAAGTG
CCACTGACCC TGATCATCGA GGATGCCAAG GGCGCCAAGG AAACCCTGGA CGTTCAGGCG
CAAGTGCGTG CACTCAACGC CGACGCGGGT GGTGGGTATG ATCACATGCA CATGAACCAC
TGA
 
Protein sequence
MSMQPIKRGL AALVLMGLAL PALAQTTVSD AWVRASVPHQ QSTGAFMVLT ASSDSKLVGV 
ASPVAKTVQV HEMTMNGDVM GMREVKAVEL PAGKAVTLDP NGLHVMLMGL NNQVKEGDKV
PLTLIIEDAK GAKETLDVQA QVRALNADAG GGYDHMHMNH