Gene Pput_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3299 
Symbol 
ID5193010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3708206 
End bp3708757 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID640587746 
Producthypothetical protein 
Protein accessionYP_001268609 
Protein GI148548507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.43455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCC GGTCACTGAC CCTCGCAACC TTGCTTGCTG TTGCCGGCCC CCTGTTTGCC 
GCAGACAGTG ATGCGCCTCT AGCCAAGGAA CTGGGCAAGG CCAGACCATT GGTGGTTATC
GCTCCCAGCA GTGCCGACCC AACGTTGCGA GGGCTGAACA AAGCGCTCGA GGACCCGGCC
ACACAGGCAG CGTTCAAGGA GCGCAACCTT GTCCTGTACA GCGTCGCCAA CATGATGGGC
AAGCGAGAGG ACAAGAACCT CGAGCAGCAG ACCACAATGG CCCTGATTCG GGAACTGAAG
CTGGGTGCGA GCAAGGGTAC CAAGGTGATC CTGGTGGGCA AGGATGGTGA GCGGCACATG
CTCAAGGACG ACGACACCGG CGAGGCCATC GACCCACAGG TGATCCTCAA AGCGGTCGAT
GAACTGCCTG CCAGCGAAAA GGCGGTGGCG GCGCCCGAGC CCGTAGCGGC GGCCCCGCAA
GCCAAGGACA AGGACAGCAA GCCGGCCAAG CCCGCCAAGC CAGCGGCCCC GCCCAAACCG
CTGGAAGACT GA
 
Protein sequence
MLVRSLTLAT LLAVAGPLFA ADSDAPLAKE LGKARPLVVI APSSADPTLR GLNKALEDPA 
TQAAFKERNL VLYSVANMMG KREDKNLEQQ TTMALIRELK LGASKGTKVI LVGKDGERHM
LKDDDTGEAI DPQVILKAVD ELPASEKAVA APEPVAAAPQ AKDKDSKPAK PAKPAAPPKP
LED