Gene Pput_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3272 
Symbol 
ID5191900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3679955 
End bp3680854 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content60% 
IMG OID640587719 
Productaspartyl/asparaginyl beta-hydroxylase 
Protein accessionYP_001268582 
Protein GI148548480 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CACTCGTACT TATCTTCGTC TTCTCGATCG CCTATGTTCA CCTGCGCGGT 
CGGGTTCGCC ACAAGCTGAC TCGCCAGCTG GGCGACCACT CCAGCTTCCT GGCCCCGATC
AACAGCTTCC TGTACCTGTT CTCCAAACAC CCGGCCAAGC CCTACCTGCC GGTCGAGGCC
TTTCCAGAAC TGAAACCGCT GCAGGACCAC TGGCAGGAGA TCCGTGAGGA AGGCCGCCAG
TTGCTGCACG TAGGCGAAAT CAAGAAATCC GACAATTACG ATGACGTCGG TTTCAACTCG
TTCTTCAAGA CCGGCTGGAA ACGTTTTTAC CTGAAGTGGT ATGGCGAAAG CCACCCGTCG
GCAATGGCCC TTTGCCCACG CACGACCGAG CTGCTGCAAG GCATCGGCAC GGTCAAGGCC
GCCATGTTCG CTACCCTGCC TCCGGGAGCC AAGCTGGTGC GCCACCGTGA CCCGTATGCC
GGCTCGTACC GCTACCATCT GGGCCTGGAT ACCCCGAATG ACGACGGCTG CTACATCGAC
GTGGACGGCG AGAAATACGC CTGGCGCGAT GGTGAGGGGG TGATCTTCGA CGAAACCTAC
ATCCACTATG CAGCCAACAC CACCGAGCAC AACCGCATCA TCCTGTTCTG CGACGTCGAA
CGCCCGCTCA AGTACCGCTG GGCAACCGCG TTCAACCGCT GGTTCAGCCG CAACGTGATG
GCCGCTGCCG CTGCGCCCAA CGATGCCAGC GACAAGACCG GTGGCATCAA CCGCCTGTTC
ACCCGCATCT ACAAGATCCG CGAGCGTGGC AAGGCGCTGA AGAAGCGCAA CCGCCTGCGC
TACTACCTGG AAAAATGGGC AGTGGTCGCG GCGTTGGTGC TGGTGTTCAT CTACATCTGA
 
Protein sequence
MKIALVLIFV FSIAYVHLRG RVRHKLTRQL GDHSSFLAPI NSFLYLFSKH PAKPYLPVEA 
FPELKPLQDH WQEIREEGRQ LLHVGEIKKS DNYDDVGFNS FFKTGWKRFY LKWYGESHPS
AMALCPRTTE LLQGIGTVKA AMFATLPPGA KLVRHRDPYA GSYRYHLGLD TPNDDGCYID
VDGEKYAWRD GEGVIFDETY IHYAANTTEH NRIILFCDVE RPLKYRWATA FNRWFSRNVM
AAAAAPNDAS DKTGGINRLF TRIYKIRERG KALKKRNRLR YYLEKWAVVA ALVLVFIYI