| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3182 |
|---|
| Symbol | |
|---|
| ID | 5190793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3596307 |
|---|
| End bp | 3597482 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640587626 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001268492 |
|---|
| Protein GI | 148548390 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.372943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCA ATCCACCGCT TATCGCACTC GCCATCGGTG CCTTCGGCAT CGGCGTTACA
GAGTTCGCCC CCATGGGCAT GTTGCCCAGT ATCGCTACCG ACCTTGGCGT TTCCATCCCT
GCTGCCGGGC TGCTGGTCAG TGCCTATGCC ATCGGCGTGC TGATCGGCGC GCCGCTGATG
ACCCTGGCCA CGGTGAAGAT CCCGCGCCGT TACCTGTTGA TCGGGCTGAT GGCCATTTTC
ACCTTGGGCA ACCTGATGTC GGCCCTGGCC AGCGACTACG CCAGCCTGCT GGTGGCCCGC
GTGGTCACTT CACTCAACCA CGGCGCCTTC TTTGGCATCG GCTCGATCGT CGCGGCCAGT
GTGGTGCCGC CGGCGAAGCG CGCCGGGGCC GTGGCTGCAA TGTTCATGGG GTTGACCCTG
GCCACCATCG GCGGCGTGCC GTTGGCGACC TGGTTGGGTG AAATGCTGGG TTGGCGCACG
GCGTTCTGGG GGATTGCCGG GCTTGGCCTG GTGGCGATGA CCACGCTCTG GTACGCACTG
CCCAATGTTG CGTCGCCCAA GGGCGAGGGT GCCCTGGCCG AGATCCGTGT GCTGGGCCGC
AGGCCGGTAC TGGCGGCCTT GTTGCTGACC GTGGTGGGTT CCAGCGCCAT GTTCACGGTG
TTCACCTACA TTGCGCCGAT CCTGCAGCAT GAAGCGGCGG CGTCCACCCC TTTCGTGACG
GCCATGCTGG TGCTGTTCGG TGTCGGCCTG ACCTTGGGCA ACGTGTGGGG CGGCAAGGCG
GCGGACCGCT CGATCGATCG TACCCTGATC CTGTCACTGG CTGGGCTGAT TGCCGTGCTG
CTGGTGTTTC CGCTGGTACT GGACTGGCCG CTGCCGACTG CCCTGGCGAT CCTGGTTTGG
GGGGCGGCCA GCTTTGCCCT GGTGCCGCCG CTGCAAATGC GGGTCATGGA AGCGGCCAAG
GATGCGCCCA ACCTGGCCTC GGCGGTGAAC ATTGGCGCGT TCAACCTGGG CAATGCGATC
GGTGCGGCGC TGGGCGGCGC GGTGATCAAC GCGGGGCTGG GCTACCCGGC GATTTCCCTG
GCGGGGGCTG CGATGGCGGC GCTGGGGCTG GTGCTGGTGC TGCTGCTTGC CTGGCGTGGG
CGAGGGGTGG TAGCCGGGCG GCAGGTTGCG CTGTAA
|
|---|
| Protein sequence | MRINPPLIAL AIGAFGIGVT EFAPMGMLPS IATDLGVSIP AAGLLVSAYA IGVLIGAPLM
TLATVKIPRR YLLIGLMAIF TLGNLMSALA SDYASLLVAR VVTSLNHGAF FGIGSIVAAS
VVPPAKRAGA VAAMFMGLTL ATIGGVPLAT WLGEMLGWRT AFWGIAGLGL VAMTTLWYAL
PNVASPKGEG ALAEIRVLGR RPVLAALLLT VVGSSAMFTV FTYIAPILQH EAAASTPFVT
AMLVLFGVGL TLGNVWGGKA ADRSIDRTLI LSLAGLIAVL LVFPLVLDWP LPTALAILVW
GAASFALVPP LQMRVMEAAK DAPNLASAVN IGAFNLGNAI GAALGGAVIN AGLGYPAISL
AGAAMAALGL VLVLLLAWRG RGVVAGRQVA L
|
|---|
| |