| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3166 |
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| Symbol | |
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| ID | 5190416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3581887 |
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| End bp | 3583278 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640587612 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001268478 |
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| Protein GI | 148548376 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03329] putative aminophosphonate oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.659262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCT TCTGGCTGCA ACAGGCCCTG GATTCGGCGC AGGAGGCGGT ATGCCCGCCG
CTGCAAGGCG ATACCCGTTG CGATGTGTGC ATTGTCGGCG GCGGCTACAC CGGCCTGTGG
ACGGCGCTGA TGCTCAAGGA AGCGGTACCG GCCCTGGATG TGGTGCTGAT CGAGGCCGAC
ATCTGTGGTG CCGGTGCCAG CGGCCGCAAT GGGGGGTGTG CGTTGTCCTG GTCGGCCAAG
TACTTCACCC TCGAACGCCT GTTCGGGGCG GCGGAGGCGG TGCGGCTGGT GCGCGAGTCG
GAGCGCAGCA TCGCAGACAT CGGTGTGTTC TGCGCGGCCA ATGGCATCGA CTGCGACTAC
CGCCTGGACG GCACGCTGTA CACGGCCACC AACGCAGCGC AGGTCGGTGC CACCGACGCG
GTGATCGCCG CGTTGGAGCA CAAGGGCATC AACTCGTTCC GCCGCTTGCC GCTGGAGCAG
GTGCAGCGCC TGGCCGGTTC GGCACGGCAC CTGGAGGGCT GGTTCTCGCC GGCCGCCGCC
ACCGTGCAGC CTGGCAAACT GGTGCGCGGC CTGCGCCGCG TGGCCTTGCA GCGCGGCGTG
CGGCTCTACG AAGGCACCGC CATGACCGGC CTGGAGCACG GCGCCCCGGT GCAGGTACGC
ACGGCCCACG GCACGCTGCG CGCCGACCGT GTCGTGCTGG GCCTCAATGC CTGGATGGCG
CGCGTCTTCC CGCAGTTCGA GCGCAGTGTG GCGATCGTTT CCAGCGACAT GGTCATTACC
GAACCGTGCC CCGAGCTGCT GCGCCAGATC GGCCTGGACA GCGGCATCAG CGTGCTCGAC
TCGCGTATTT TCGTGCACTA CTACCACAAC ACCTCCGATG GCCGGCTGAT GCTCGGCAAG
GGCGGCAACA CGTTTGCCTA TGGCGGGCGC ATGTTGCCGG TGTTCGACCA GCCGTCGCCG
TATCGGCGGT TGCTGCGCGA AAGCCTTGGC GGCTTTTTCC CGGCCTTGGC CGAGGTGCCA
CTGGCGGCCA GCTGGAACGG GCCGTCGGAT CGCTCGGTAA CCGGGCTGCC GTTCTTTGGT
CGGTTGGACG GGCAGGGCAA CGTGTTCTAT GGCTTTGGTT ACTCCGGCAG CGGTGTTGGC
CCGTGCCACA TGGGCGGGCA GATTCTTTCG TCGCTGGCGC TGGGGCTGGA CAACCCGTGG
ACCCGGTCGC CGCTGGTCAA AGGGCCGCTG GGGCTGTTCC CGCCCGAGCC GATCCGCTAC
CTGGGCTCGC TGATGGTGCG CAATGCCATC CGCCGCAAGG AGCAGGCCGA AGATCGTGGT
GTGCGCCCGC GAAGGCTGGA CGTGCGGTTG GCGCGGTTTG CCGCGGCGGC GGGCAAAGCC
GATAAAGGCT GA
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| Protein sequence | MRPFWLQQAL DSAQEAVCPP LQGDTRCDVC IVGGGYTGLW TALMLKEAVP ALDVVLIEAD
ICGAGASGRN GGCALSWSAK YFTLERLFGA AEAVRLVRES ERSIADIGVF CAANGIDCDY
RLDGTLYTAT NAAQVGATDA VIAALEHKGI NSFRRLPLEQ VQRLAGSARH LEGWFSPAAA
TVQPGKLVRG LRRVALQRGV RLYEGTAMTG LEHGAPVQVR TAHGTLRADR VVLGLNAWMA
RVFPQFERSV AIVSSDMVIT EPCPELLRQI GLDSGISVLD SRIFVHYYHN TSDGRLMLGK
GGNTFAYGGR MLPVFDQPSP YRRLLRESLG GFFPALAEVP LAASWNGPSD RSVTGLPFFG
RLDGQGNVFY GFGYSGSGVG PCHMGGQILS SLALGLDNPW TRSPLVKGPL GLFPPEPIRY
LGSLMVRNAI RRKEQAEDRG VRPRRLDVRL ARFAAAAGKA DKG
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