Gene Pput_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3148 
Symbol 
ID5194184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3542710 
End bp3543636 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content65% 
IMG OID640587594 
Productalpha/beta hydrolase fold 
Protein accessionYP_001268460 
Protein GI148548358 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGC TGTGCAGTCC GAAAGACCAC CTGCTAGACC TCGATGGCGT TGAAATTGCG 
GTTCGAACCT GGGGGGCAGA AGACGGTATT CCCATATTGG CCTTGCATGG CTGGCTGGAT
AACGCTGCCT CGTTCGAGCG CCTGGCACCG ATGCTGGACG GCTGCTTCGT GGTGGCCCCC
GACCTGATCG GCCATGGCCG TTCCGGGCAT CGTCGCCACG ACAGCGGCTA TTACCTGTGG
GAGCATGCCG AAGACATGCT GGCGGTGACC GATAGCCTGG GCCTGGCGCA ATTTCATGTG
CTGGCCCATG GGATGGGCAC CGGTATAGCG TCGCTGCTGG CGGCCATGAC CAGTGGCATT
GCCAGCATGA CCTTCCTCGA CGGCATGGGG GCACCGTTCA CGGTGGCCGA GGATGACCGC
GTGCAGCACC TGGCGCGGGC TTACCGGCTC AAGCGCATGG TACAGCGTAG CCAGTTGCCG
GGTTTTGCCG AGCCGGATGT TGGTCGCTTC GACGACCTGG ACACCGCCCT GGCGCAACGC
CGCGAGCGGC TGGACACCGA ACTGTCGGAA GGTGCCGCTC GGCTGCTGGC GCTGCGCGAC
CTGCTGCAGC TGGACGATGG CTATTGCTGG CGCCACGACC CGCGGCTGGT ATTGCCCGAA
CCCATGCCAC TGACCGAGCG CGAAGCCTGC GACCTGCTCA GTCAGATCCG CTGCCCGTTG
TACCTGCTGT TCGGCCGCCA GGGGGCCTTC ACCGGCGAGG CCTTTACCCG GCGTCAGGCC
GCCTTGCCCA GCCAGGCGAA AGTCTCCTGG CACCCAGGCG GGCACCACTT CCACCTGGAT
GCGCCGGACC GGGCGCTGGT CGACCAGTTG CTGCGTATCC TGACGCGCCA TGAAGGGGGC
GTTCTGCAAC GCTTGGTGAA CGAGTAG
 
Protein sequence
MRSLCSPKDH LLDLDGVEIA VRTWGAEDGI PILALHGWLD NAASFERLAP MLDGCFVVAP 
DLIGHGRSGH RRHDSGYYLW EHAEDMLAVT DSLGLAQFHV LAHGMGTGIA SLLAAMTSGI
ASMTFLDGMG APFTVAEDDR VQHLARAYRL KRMVQRSQLP GFAEPDVGRF DDLDTALAQR
RERLDTELSE GAARLLALRD LLQLDDGYCW RHDPRLVLPE PMPLTEREAC DLLSQIRCPL
YLLFGRQGAF TGEAFTRRQA ALPSQAKVSW HPGGHHFHLD APDRALVDQL LRILTRHEGG
VLQRLVNE