| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3070 |
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| Symbol | |
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| ID | 5192500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3453688 |
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| End bp | 3455037 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587516 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_001268382 |
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| Protein GI | 148548280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.14369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCACG GAAAAACCCT GGAAGCCTGG CAACAAAGCC ACCCGATCAT CGCCGAGCTG
GTGGCCCTGA AGCCAACCAG CTGGTTCAAC CCTGGCATCG CCAAGGCTGC AGAAGCCCTG
CACGATGTGG GCCTGACGGC GGCCGACGTG CAAGCGGCCA GCGCGCGGCT GCTGCGGTTC
GCGCCTTACC TGGCCACTGT GTTCCCCGAA ACAGCCGCTG CCGGCGGGGT CATCGAGTCG
CCTGTCATCC CGCTGCCACA GCTGCGCCGG GTGCTTGTCG AAGAAGGATC ACTGCAGAAC
GCAGGCAGCC TGTGGCTCAA GGCGGACAGT GACCTGCCCA TCTCCGGTTC GATCAAGGCC
CGGGGCGGTA TCCATGAAGT GCTCAAGCAC GCCGAGGACC TGGCCCTGGC TGCCGGCTTG
ATCACGCCAA CGGATGACTA CACCAAACTG GCGAGCGACC AGGCCCGCGC ATTCTTCAGC
CAGTACACGA TCGCCGTGGG CTCGACCGGC AACCTGGGGC TGTCGATTGG CATCATGAGC
GCCAAGCTGG GCTTCCAGGT GAGCGTGCAC ATGTCGTCTG ACGCCAGGCA ATGGAAGAAG
GACAAGCTGC GGGCCAATGG CGTCACGGTG GTCGAACACG CCTCCGACTA CAGCGTGGCG
GTCGAGCAAG GCCGCCAGCA GGCGGCATCC GACCCCCGCT GTTACTTTGT CGACGACGAG
AACTCCCCGC AGCTGTTTCT CGGTTATGCC GTGGCCGCCG AACGGTTGGC GCGGCAATTC
GACCAGGCGG GCATCCAGGT TAACGCAGAT CATCCATTGT TCGTGTACCT GCCGTGCGGC
GTAGGGGGCG GCCCAGGCGG AGTTGCGTTC GGGCTGAAGC TGGTGTTCGG CGATGCGGTG
CACTGCATCT TCGCCGAGCC CACCCATTCC CCCTGCATGC TGCTGGGTGT CTATACCGGC
CTGCACGATG AAACCAGCGT CCAAGACTTC GGCATCGACA ACATCACCGC CGCCGACGGC
CTGGCGGTCG GGCGCCCATC AGGGTTTGTC GGCAAAGCCA TGCAGCGCCT GATCGATGGT
TACTACACCG TGGCCGACGA AGAACTGTAC CGCTTGATGG TCATCGCCCA TGAGCAGGAC
AAGGTCAAAC TGGAACCCTC TGCCCTGGCC GGCGTACCCG GTATGCTGCG GGTGCTGCAA
GCAGGCGAGT ACCTGGCTCG CCAGGGCTTC ACCCCAACCC AGCTGCAGCA GGCTACACAC
CTCGTCTGGG GGACGGGAGG CAGCATGGTG CCGGACGATG AATTCAACAC CTATCTGGCG
AAAGGGCGCA GCCTGCAGGC AAATGTGTAA
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| Protein sequence | MIHGKTLEAW QQSHPIIAEL VALKPTSWFN PGIAKAAEAL HDVGLTAADV QAASARLLRF
APYLATVFPE TAAAGGVIES PVIPLPQLRR VLVEEGSLQN AGSLWLKADS DLPISGSIKA
RGGIHEVLKH AEDLALAAGL ITPTDDYTKL ASDQARAFFS QYTIAVGSTG NLGLSIGIMS
AKLGFQVSVH MSSDARQWKK DKLRANGVTV VEHASDYSVA VEQGRQQAAS DPRCYFVDDE
NSPQLFLGYA VAAERLARQF DQAGIQVNAD HPLFVYLPCG VGGGPGGVAF GLKLVFGDAV
HCIFAEPTHS PCMLLGVYTG LHDETSVQDF GIDNITAADG LAVGRPSGFV GKAMQRLIDG
YYTVADEELY RLMVIAHEQD KVKLEPSALA GVPGMLRVLQ AGEYLARQGF TPTQLQQATH
LVWGTGGSMV PDDEFNTYLA KGRSLQANV
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