| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3067 |
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| Symbol | |
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| ID | 5194610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3450320 |
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| End bp | 3451099 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587513 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001268379 |
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| Protein GI | 148548277 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.256607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT CCATTCGCCA CGACACGACC TATAGCTACG CCAGCGACGT GTGCAACAGT
ATCCAGTTCC TGCGCCTGAC GCCGCGCAGC AGCGAACGCC AGCGTATCAA TCAATGGCAA
CTGGACCTGC CCTGCAAGGT CAAGGGCCAG ATCGACCCTT ACGGCAACAT CCTGCATGTG
CTGACGCTGG ACAAACCCCA TGGCCACCTG GCGCTTACCG CACACGGCCA GGTCGAGATC
GACCCGGATT GCGAACACGA AACCGAGAGC CAGTCGCCCC TGCCGTTCCT GCGCGGCAGC
CACCTGACAC AGGCCGACGA CAACCTGATT GCTTTCGCCG CCCGGCAATG TGGCAGTCAC
CGCGACCGGG CAGCACTGAT CGGGCTGATG CAAGGCCTGG CCGAGCACAT GCCCTACAGC
CCTGGGGCCA CGTCGGTGGG CACCACGGCC ATCGAAGCCT TCAACGGTGG CGCAGGCGTG
TGTCAGGACC ACACCCACGC CTTCCTGGCC TGCGCACGCA GCCTGGGGGT GCCGGCACGC
TATGTGTCCG GCTACCTGTG CACCGAGGAC GAACAGCACC TGGCCAGCCA CGCCTGGGCC
GAAGCCTGGG TCGACGAAGC CTGGTACAGC TTCGACATTA CCAACCGCCT GACCCGGCCA
GAGCGTCACC TGAAGCTGGC GGTGGGCCTG GACTACCTCG ATGCCTGTCC GGTCAGGGGC
GTACGCCGCG GCGGCGGCGC CGAATCGATG CAGGCCAGCG TCCACGTGCA TCGCCAGTGA
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| Protein sequence | MKLSIRHDTT YSYASDVCNS IQFLRLTPRS SERQRINQWQ LDLPCKVKGQ IDPYGNILHV
LTLDKPHGHL ALTAHGQVEI DPDCEHETES QSPLPFLRGS HLTQADDNLI AFAARQCGSH
RDRAALIGLM QGLAEHMPYS PGATSVGTTA IEAFNGGAGV CQDHTHAFLA CARSLGVPAR
YVSGYLCTED EQHLASHAWA EAWVDEAWYS FDITNRLTRP ERHLKLAVGL DYLDACPVRG
VRRGGGAESM QASVHVHRQ
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