| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3020 |
|---|
| Symbol | |
|---|
| ID | 5190522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3410184 |
|---|
| End bp | 3410672 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640587466 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268332 |
|---|
| Protein GI | 148548230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.428911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCC GCTGGCTGAT CGCCAATGCC CTCTGGCTGC AAGCCGGCTG GTGGGTCTGC
GTGCTGGGGG CCGAGCGGCC CTTGTTGTTG CTGCTGGTGA TTCCGGGCGT GGCAGTGCAC
CTGCGCCTGC GCCCGGACAT CCATGCCGAG GTCAAGGCGC TGGTGCGCGT CACCTTTATC
GGCTGTGTGC TCGACAGCGC GCTGGGAGCA CTGGGGGTGT TCGGTTTCGA CGCCTGGCCC
CTGCCGCTGT GGCTAGCGCT GCTGTGGTTG GTGCTGGCCA GCGGGATGCG TCACAGCCTG
GCATGGGCCG GCAGGCACTG GCGAATCGGC GCACTGCTGG GGGCGATTGG CGGCCCTCTG
GCCTACGTAG GCGGCGCCAG GCTGGCAGGT GTCGCCTTGC CCTTGGGCGC GCTGGAAACC
GGCCTGCTAC TGATGCCGAT TTGGGCGTTG GCCCTGCCCC TGCTGGCGCG CATCGCGGCG
CGGCGCTGA
|
|---|
| Protein sequence | MRSRWLIANA LWLQAGWWVC VLGAERPLLL LLVIPGVAVH LRLRPDIHAE VKALVRVTFI
GCVLDSALGA LGVFGFDAWP LPLWLALLWL VLASGMRHSL AWAGRHWRIG ALLGAIGGPL
AYVGGARLAG VALPLGALET GLLLMPIWAL ALPLLARIAA RR
|
|---|
| |