| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2995 |
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| Symbol | |
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| ID | 5190854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3384365 |
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| End bp | 3385393 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587441 |
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| Product | ABC-type sugar transport system periplasmic component-like protein |
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| Protein accession | YP_001268307 |
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| Protein GI | 148548205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.700398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.882124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA ACGACTGCTC CGGCATTTCC CGGCGCTGCC TGCTCGGCGC GTCTTCGGCG
ATGCTCGCTC TCGGGCTTGC CGCACCATTG ACCCGCACCA TGGCGGCTGG AGCCGACAGC
GGTGCAGAGG CCAGTGCCAC AGTGCCTTCG CTCAAGGGCA AGCGCATCGC CATCAGCACC
GTGGGCACCA GCATCTACTT CGACAGCCGG GCCTTCAAGG CGCAGGTCGA GGAGGTACAG
CGCCTGGGCG GCACGCCGAT CACCCTGGAT GCCGGGCGCA ACGACAAGGC CATGGTGACC
CAGTTGCAGA ATCTGGTGAC GCAGAAGCCC GATGCAGTGA TTCACACCCT CGGCACGCTG
AGCATCATCG AGCCCTGGTT CAAGCGCATC AGCGCCGCCG GCATCCCGCT GTTCACCATC
GAGGTGCCGT CGCAGTACGC GGTCAATACG ATTTCCGCAG ACAACTGGAG CACGGGTTTG
CTGCTGGCCA AGCAGTTGGT GGCCGATCTG CGCGGCAAGG GCAGGGTGCT GCTGTTCAAT
GGCTTCTATG GCGTGCCGAG CTGCGGCATT CGCTATGACC AGTTGAAGCT GGTGAGCAAG
TTCTACCCGC AGATCGAGTT CATCCAGCCG GAGTTGCGCG ACGTGATTCC CAACACCGTG
CAGGATGCCC GCAGTCAGGT TGCCGCCTTG CTCAACAAGT ACCCCAAGGG TGAGCTCGAC
GCGATCTGGG CGGCCTGGGA TCTGCCGCAG CTCGGTGCCA GCCAGGCGCT GATCGAAGCC
GGGCGCAATG AAGTGCGCAC CTATGGCGTC GACGGTACGC CCGAGGTGCT GGAACTGCTG
CGCCAGCCCG GCAGCCCGGT GGCTGCAGTG GTGGCGCAGC AGCCTGCGTT GATTGGCCGT
ACGGCGGTGC ATAACGTCGC CCGCTACCTG GCCGGCGAGC ACGATCTGCC GCCCGAAACC
TTCGTCGAGA CCCTGCTGAC CACGGCGGGC AACGTCGATG ACGTCAAACG CATCCGAGGC
GACGCATGA
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| Protein sequence | MSDNDCSGIS RRCLLGASSA MLALGLAAPL TRTMAAGADS GAEASATVPS LKGKRIAIST
VGTSIYFDSR AFKAQVEEVQ RLGGTPITLD AGRNDKAMVT QLQNLVTQKP DAVIHTLGTL
SIIEPWFKRI SAAGIPLFTI EVPSQYAVNT ISADNWSTGL LLAKQLVADL RGKGRVLLFN
GFYGVPSCGI RYDQLKLVSK FYPQIEFIQP ELRDVIPNTV QDARSQVAAL LNKYPKGELD
AIWAAWDLPQ LGASQALIEA GRNEVRTYGV DGTPEVLELL RQPGSPVAAV VAQQPALIGR
TAVHNVARYL AGEHDLPPET FVETLLTTAG NVDDVKRIRG DA
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