| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2982 |
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| Symbol | |
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| ID | 5190618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3370929 |
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| End bp | 3372032 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587428 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001268294 |
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| Protein GI | 148548192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.165911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGC TGACCCTCCC CCCTTCGCCG TCACTGGCCA CCTCGATCCG GGCGACCGCA
CAGGTCTTCG AAGACGCTAG ATCGCAGGCG CTGCTCGCCC ACCTGCAACA GGTCGCCCCC
AGCGAGGCCA GCGTCCTGAT CATCGGCGAG ACCGGCACGG GCAAGGAGCT GGTCGCACGC
CACATACACA ACCTCAGCGG ACGGCGCAAC GGCCCCTTCG TCGCGGTGAA CTGTGGCGCC
TTTTCGGAGT CGCTGGTGGA AGCCGAGCTG TTCGGCCACG AGAAAGGCGC CTTCACCGGC
GCCCTGGCGG CCAAGGCCGG CTGGTTCGAG GAGGGCAACG GCGGCACACT GTTCCTCGAC
GAAATCGGCG ACCTGCCCAT GGCCATCCAG GTCAAGCTGT TGCGCGTGCT GCAAGAGCGT
GAAGTGGTGC GCCTGGGCTC GCGCAAGAGC ATCCCCATCG ACGTGCGCGT GGTCGCCGCC
ACCAACGTGC AACTGGACAA GGCCATCGCT GCCGGCAACT TCCGCGAAGA CCTGTACTAC
CGCCTCAACG TGGTCAGCCT GCAACTCTAC CCGCTGCGAG AACGCCCGGG CGACATCCTG
CCGCTGACCC GACACTTCAT CAAGACCTAC TGCAACCGCC TGGGTTACGG CGAAGTGCGC
CTGTCCCCCG AGGCCGAACG CAAGCTGGTG AGCTACGACT GGCCCGGCAA CATCCGCGAG
CTGGAAAACG TCATCCACCA CACCCTGCTG GTGTGCCGCA ATGGCCTGGT GCAGGACGAC
GACCTGCGCC TGTCGCACCT GCGCATCGAG CGCCAGGACA AGTCGCCGGT GAGCACTGCC
GAAAGCGCCG AAGAGCAGTT GCTGCGCGCC TTTCAGCGCC TGTTCGAGGA GCAGGCCGGC
AGCCTGCACG AGAAGGTCGA GGACACCCTG CTACGCAGTG CCTATCGTTT CTGCCACTGC
AACCAGGTGC ACACGGCCAG TCTGCTGGGT CTGAGCCGCA ACATCACCCG CGCCCGACTG
ATTGCCATCG GCGAACTGGT GGTCAATCGG CGCCGGCCAG AGCCCCAGAT GCGCCCTGAG
CGGGCGATAC AACTATCAAT CTGA
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| Protein sequence | MQLLTLPPSP SLATSIRATA QVFEDARSQA LLAHLQQVAP SEASVLIIGE TGTGKELVAR
HIHNLSGRRN GPFVAVNCGA FSESLVEAEL FGHEKGAFTG ALAAKAGWFE EGNGGTLFLD
EIGDLPMAIQ VKLLRVLQER EVVRLGSRKS IPIDVRVVAA TNVQLDKAIA AGNFREDLYY
RLNVVSLQLY PLRERPGDIL PLTRHFIKTY CNRLGYGEVR LSPEAERKLV SYDWPGNIRE
LENVIHHTLL VCRNGLVQDD DLRLSHLRIE RQDKSPVSTA ESAEEQLLRA FQRLFEEQAG
SLHEKVEDTL LRSAYRFCHC NQVHTASLLG LSRNITRARL IAIGELVVNR RRPEPQMRPE
RAIQLSI
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