| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2981 |
|---|
| Symbol | |
|---|
| ID | 5190617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3369733 |
|---|
| End bp | 3370920 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640587427 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_001268293 |
|---|
| Protein GI | 148548191 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCC CTCTACGACC TGCCGTGCTC AGCCCCTTGC AGACTGCACG TCGCCTTGCG
ACGGCGTTCG CCGAAACCGC CGTCGAGCGT GACGAGGCCG GCGGCACACC CAAGGCCCAG
CGCGACGCTA TCCGCCAGAG CGGCTTGTTG GCGCTGAGCA TACCCACCCA GTTCGGCGGC
CTCGGCGCCA GCTGGAGCGA AACCCTGGAG GTGGTGCGCG AATTCGCCCG GGTCGACAGT
TCCATCGCCC ACGTCTTCGG CTTTCAGCAC CTTATGCTGG CTACCGTACG CCTGTTCTCC
CGCCGCGATC AGTGGCAACC CTGGTTCGAG CAGACCGCGC GCAAGAACTG GTTCTGGGGC
AATGCGCTCA ACCCCCTGGA CAGCCGCACC GTACTCACTC GCTTCGACGG TTGGTACGAG
TTTTCCGGCA AGAAGAGTTT CTGCTCAGGC GCCAGCGACT CGGAAATGCT GATTGCCTCG
GCAGTCGATG AAAGTGCTGG CGGCAAGCTG CTGATCGCTG CCATCCCCAG CGGCCGCACC
GGTATCACAC TGCATGATGA CTGGAACAAC ATGGGCCAGC GCCAGACCGA CAGCGGCAGC
GCTACTTTTG AGCGCGTGCG CGTCGAAGAG AACGAGATGC TTCTCGACCC CGGCCCGCTG
AGCACCCCCT TCGCCAGCCT GCGCCCGCTG ATCGCCCAGT TGCATTTCGC CAACGTATTC
CTTGGTATCA CCGAAGGCGC TCTGGAAGAG GCCCGCCATT ACACGTTGAA GGAAGGCCGC
CCGTGGTTCC GCTCCAAAGC CCGACATGTC AGCGAAGACC CTTACATCCT GCGCCACTAC
GGCGAGTTCT GGGTCGGTCT GGAAGGCGTG CGCCTGCTGG TGGAGCGCGC CGCTACGCAA
CTCGACGCGG CCTGGCACAA GGAGCACGCG CTCGGCGCCG AAGAGCGTGC GCAACTGGCG
CTGGCCATCG CCACGGCCAA GGTGGCGGCG GCACGCACTG GCCTGGACAT CTGCAACCGC
CTTTTCGAGG TCACTGGCGC ACGCGCGACC CACGCCTCGC TGCGCCTCGA TCGCTACTGG
CGCAACCTGC GTACCCAGAG CCTGCACGAC CCGCTGGACT ACAAACTCCA CGAGCTGGGT
GAGTGGGCAC TGAGCCAGAC GCGACCCACC CCATCTTTCT ACTCATAG
|
|---|
| Protein sequence | MTTPLRPAVL SPLQTARRLA TAFAETAVER DEAGGTPKAQ RDAIRQSGLL ALSIPTQFGG
LGASWSETLE VVREFARVDS SIAHVFGFQH LMLATVRLFS RRDQWQPWFE QTARKNWFWG
NALNPLDSRT VLTRFDGWYE FSGKKSFCSG ASDSEMLIAS AVDESAGGKL LIAAIPSGRT
GITLHDDWNN MGQRQTDSGS ATFERVRVEE NEMLLDPGPL STPFASLRPL IAQLHFANVF
LGITEGALEE ARHYTLKEGR PWFRSKARHV SEDPYILRHY GEFWVGLEGV RLLVERAATQ
LDAAWHKEHA LGAEERAQLA LAIATAKVAA ARTGLDICNR LFEVTGARAT HASLRLDRYW
RNLRTQSLHD PLDYKLHELG EWALSQTRPT PSFYS
|
|---|
| |