| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2962 |
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| Symbol | |
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| ID | 5190382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3342578 |
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| End bp | 3344365 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640587408 |
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| Product | relaxase |
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| Protein accession | YP_001268274 |
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| Protein GI | 148548172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.290207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGGG GCGCAAGGGT AAGAGGCTTA TCCGAAAAGG CAAAAGGACC TTTTGAACGC
AAGACAGGTA CTGCGATGAA ACGCTGGTGG TTCAAACCGC AAAAAGGCCT TCCCGAAGAG
TCCACCCCCG CCGCCGTGGG CTTTCATCAA CCACTGTCGG CGGAATCACT GCTCGCTGCC
AGCCATCGAA AAAAGCTGCT TGCTCGCATC TGGCAGTACA CGGCCCTCTC CCCGCCACAG
TTCGAACAAC TCTACCTCGA ACCGATTCGT CGCTACGCCA CCTATGTACA GCAACTACCG
GCCAGTGAGA GCCATCACCA TGCCTACCCA GGTGGCATGC TCGACCACGG CTTGGAGCTG
GTGGCATGCA GCCTGAAGTT GCGCCAGTCC TACCTGCTCC CCGGTGGTGC CGCTCCGGAA
GACCAGGCTG CGCAGGCTGA TGCCTGGAGC GCCGCCATTG CCTATGGCGC CCTGCTCCAT
GACGTGGGTA AAATCGCCGT CGATCTCCAG GTGGAGTACC AGAATGGTGA CCGCTGGCAC
CCCTGGCACG GCCCTTTGAA TCAGCCCTAC CGCTTCCGCT ACGTCCCCGA CCGGGATTAC
CAACTGCACG GTGCCGCCGC TGGGCTGCTG TATACGCAGA TCTTGACGCC CACGCTGCTT
GACTGGCTCA GCAGCTACCC AGAATTGTGG AGACAATTGC TGTCCTTGCT GGCCGACCAC
TACGAGCAGG CCGGCACACT CGGGGAGTTG GTGCTGCAAG CAGACCGGGT ATCCACGGCA
CAGAACATTG GGGCCAACCC CACCAAAGCA CTGCAGGCAC CTAAACATTC GCTGCAGCAT
CACCTGCTCA TGGGGCTACG CCACCTGGTC AAAAACGAGT TCAAGCTCAA CCAGCCCGGT
GCTGCCGGCT GGCTCACTGT TGACCACCTG TGGTTGGTCA GCAAAACCGC GACCGACAGG
CTGCGTGCCT ACCTGTTGGC CCAATCGGTG GACGGTATTC CCTCCTCCAA CATCGCCATG
TTCGATGAAC TGCAATCACA TGGATTGGTG GATGAGACAG ATAAAGGGAA AGCGGTGTGG
AGCGCCGCCG TCACAGACGG GGACTGGCAG CATCGCTTTA CCTTTCTCCG CCTGAAACCG
AGCCTGATTT GGGCCGATGA ACCTCGGCCA GACTGCTTCA ACGGAACGAT TGAGTCGATG
ATGGGCGATT CCCTGCCACC TCATGAAGCC CGCGAGTCAG CCCCAGATCG GCCGCACGTA
GCCCCGAAAC CAAAACAGCA CGACCCCGAG CTTTTGAATC AGGATTTCGA CTACCTCGAC
GATTTGATGG AAATGTTGCA AGTGCCAGGC GAGCTCGAAA CTGGATCAAG CACGGGAAGC
CTGCAATCAA CCGCTGCGCC ACCTCAGAAT TCCGTGGGCC TTGCCTTTCT CGAGTGGCTG
CGCGACGGAA TCCACACACA TCGCTTACTG GTCAACGACA GCAAAGCAAA GGTCCACACC
GTGGATGGCA CTTTTTTCCT GGTCACTCCG GGCATTTTCC AGCGTTACGC AGCCGAGCAT
CTAGAGCAGC CTGACGGCGC GGCTCAGAAA GAACCTTGGC GACGTATTCA ACGCGAATTT
GAAAAGCTGG ATGCTCATCT GAGAAAGCCC AATAGCCAGA ACATTTGGAC TTGCACTGTA
CGAGGCCCGC GGAAAACCAC ATCCCTTAAT GGCTACATCC TGCAAAATGT CAATCTCGTT
GGTCTGACGC CACCTCCAGA CAACCCCTTC CTAAAGTTAC AGTTTTGA
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| Protein sequence | MEGGARVRGL SEKAKGPFER KTGTAMKRWW FKPQKGLPEE STPAAVGFHQ PLSAESLLAA
SHRKKLLARI WQYTALSPPQ FEQLYLEPIR RYATYVQQLP ASESHHHAYP GGMLDHGLEL
VACSLKLRQS YLLPGGAAPE DQAAQADAWS AAIAYGALLH DVGKIAVDLQ VEYQNGDRWH
PWHGPLNQPY RFRYVPDRDY QLHGAAAGLL YTQILTPTLL DWLSSYPELW RQLLSLLADH
YEQAGTLGEL VLQADRVSTA QNIGANPTKA LQAPKHSLQH HLLMGLRHLV KNEFKLNQPG
AAGWLTVDHL WLVSKTATDR LRAYLLAQSV DGIPSSNIAM FDELQSHGLV DETDKGKAVW
SAAVTDGDWQ HRFTFLRLKP SLIWADEPRP DCFNGTIESM MGDSLPPHEA RESAPDRPHV
APKPKQHDPE LLNQDFDYLD DLMEMLQVPG ELETGSSTGS LQSTAAPPQN SVGLAFLEWL
RDGIHTHRLL VNDSKAKVHT VDGTFFLVTP GIFQRYAAEH LEQPDGAAQK EPWRRIQREF
EKLDAHLRKP NSQNIWTCTV RGPRKTTSLN GYILQNVNLV GLTPPPDNPF LKLQF
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