Gene Pput_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2893 
Symbol 
ID5195529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3283248 
End bp3283979 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID640587341 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001268207 
Protein GI148548105 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.582162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG TCGATATTTC CACTCTTGAA CAGCGCGTGC GCGTGGCTGC GCGCGCGTTG 
GGCCGACATG GCCTGGTTCA GGCCTGGGGG CACTGCAGCG CCCGGATCGA TGCAGAGTCC
TTCGTGGTCT GCGCGGCCCG CCCCATGGGC CGTATCGAAG TCGGTGAGCC GGGGACGATA
GTGCCGATCG AAGGGGCGCT ACCGCCCGGT GTGCTGGGCG AGGTTCGCAT CCACCAGCAA
ATCTACCGGC GACGTCCGGA CGTGGGCGGT ATTTGTCGCT TCATGCCGCC ACATGTCGTA
GCACTCTCCA CACTGCGCAG CGTGCCGAAG CCGCGTCATG GTGTAGGTGC ATTCAATGCG
GCGTGCCGCT TCTGGGACGA TCCGCGTTTA TTGCGGGACG ACGCTTTGGC GGCGGAGCTG
GCGGCGCACC TTGGACAAGC CCCATCCCTG GTCATGCGCG CCAATGGCGC GGTGACCGTT
GGGCCTAACA TCGAACTGGC CACCGGGTTC GCTTGGTGCC TGGAGGATGC CGCCCGCATC
GAAACGCTGG TGCGCTCCAT GGTCGATGTG GCCGAGCGTG ATGATGCTTG CCTGACTGCT
GAAGAGATCG ATGCGAGACA AGTCAGTTCG GGCGCGGTCT TCGAGCGACT GTGGGATTAC
CTGACGGCGG ATGACCCGGA GAGCCTGGGC AGCGGGGCCG CATTCCCAGT TCCACAGTGG
GGACGGCCAT GA
 
Protein sequence
MSGVDISTLE QRVRVAARAL GRHGLVQAWG HCSARIDAES FVVCAARPMG RIEVGEPGTI 
VPIEGALPPG VLGEVRIHQQ IYRRRPDVGG ICRFMPPHVV ALSTLRSVPK PRHGVGAFNA
ACRFWDDPRL LRDDALAAEL AAHLGQAPSL VMRANGAVTV GPNIELATGF AWCLEDAARI
ETLVRSMVDV AERDDACLTA EEIDARQVSS GAVFERLWDY LTADDPESLG SGAAFPVPQW
GRP