| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2884 |
|---|
| Symbol | |
|---|
| ID | 5194479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3275718 |
|---|
| End bp | 3276020 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640587333 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001268199 |
|---|
| Protein GI | 148548097 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.09254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGA AAACCTCAGA CCTGAACATG CTGGTGGCGC TCAATGCGTT GATCGAGGAG
CGTTCTGTCA CGGGAGCCAC GCGGCGCCTG CACCTGAGCT CCCCGGTGAT GAGCCGGCCC
CTCGCGCGCC TGCGCGAAAC CCTGGACGAC CCGATTCTGG TCCGTGCCTA TCGGAGCATG
GTGCCGACGC CAAAGGCCCT GCAGATGCAG GAGCAGGTGC GCGGCATCGT CGAGCTGGCC
GAGGGCTACT TTGCCCAGCG CCAGGGCTTC GACCTTGACC GCCTAAGCAG GACGTTCAAA
TGA
|
|---|
| Protein sequence | MSMKTSDLNM LVALNALIEE RSVTGATRRL HLSSPVMSRP LARLRETLDD PILVRAYRSM
VPTPKALQMQ EQVRGIVELA EGYFAQRQGF DLDRLSRTFK
|
|---|
| |