| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2860 |
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| Symbol | |
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| ID | 5194977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3245876 |
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| End bp | 3247231 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587310 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001268176 |
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| Protein GI | 148548074 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGAG CGGCCCCAGG CGAGTTCGCG TATCGCAAGG TGTATCGCTA CCTGGAAGCG
TTGATCGAAC AAGCTGCAGG CGTTGGCACA TGCCGGTTGC CGTCATTGCG TGAGCTGTCC
CGGCGGCTGC GGGTGTCGTT GGCCACGGTA CAAAGTGCCT ACAGCCTGCT GGAAGAGGAG
GGCCGTGTAC ACTGCCTGCC GAGGTCGGGC TATTACGTAC AGAGCGGTGG CAAAGATCAG
GCCGTGGCCG TGGCCCGGCA GCCTCCCTTG CCGACGCAGC CACTGTTGGA GCGCATGCTG
CTTGGTCACG AACGGCGTTT AGCCCGTCAG CGTGATCGCA GCGTTGCGTC CTGGGAAGCG
CTGGGTAGCG CCCGTTTGCG CAATGCTGTG GCTGAGCGAT ACACCCGCTG CTCCAACCAG
TACTGGCATG CCGATGATGT CCAGCTAGCT CCCGATGTGC TGGCGGTGCT GGAGACGCTG
CTTGCGGCGC TGGCCCTGCA AGGTGGTACC GCATTGGTGC ATTCGCCTTG TTGCTGGCAA
GTGTTGCGCG CCCTGGCGCG TGCCGGCATG CGCGTGCTGG AAACACCACT GGATGCCCGT
GGCAACCCCG AGCTGCACGC GTTGGCCAAG CTGCTGGGTA GCGAGCCGGT AAGCCTGCTG
GTCATGCCGT CTTGCCTGGG CATGCCACAA GGTCGGCTGG TTTCACCGTA TTACCAGCAG
CAGCTTGGTC TTTTGCTTGG CCAGCACCCT GTATGGCTGC TGGAAAACGA CCTGGACAGC
GAGCTCTGTT ACGACGGGCC GCCGAGCACA CGCCTGCGTG ACTGGATCGA CCCGCGCTGG
CTTCTGGTGA TGGGCACGTT CGAGGCCGCA GTGGGGGCAG AGGCGCCGTA TGCCTATTTA
CTGAGCCGTG ACACCGTGTT GGCCAAGGCA TTCGCTGAAC GGGCGTTTCG GCTTGCGCCA
CTACGTTTGC AGGCGCTTGC TCACATGCTC GGCAAGGGGG AAATCGAAAC GCAGCTGGTA
CAGCAACGCA CAGACTTGCA AAGGCGTACG CAATACCTGG CGCATGTACT GCAGTCGCAA
TTCGGCCAAC GGGTGGTCTT CGACATGCCG CAAGGTGGGC AAATGCTGTG GGTGAGCTTT
TGCCAGCCGC TGGCGTGGGA CGGTATTGCC GCAGCGTTGG CAGGCTCTGC ATTGCACGCA
CTGCCGGGCG AGCAGTTTGG CCTGCCGGGG CATTACCCTC AACACCTTGC GCTGATCTGG
CTGGGGGGGC GCCCGGATGA ACTGCAACTG GCGGTAAGGC GACTGGCGCA GGCGCTTGAG
GTGCGCTGCG GGCGAAACAC CCGCTTCTCA AGTTGA
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| Protein sequence | MGRAAPGEFA YRKVYRYLEA LIEQAAGVGT CRLPSLRELS RRLRVSLATV QSAYSLLEEE
GRVHCLPRSG YYVQSGGKDQ AVAVARQPPL PTQPLLERML LGHERRLARQ RDRSVASWEA
LGSARLRNAV AERYTRCSNQ YWHADDVQLA PDVLAVLETL LAALALQGGT ALVHSPCCWQ
VLRALARAGM RVLETPLDAR GNPELHALAK LLGSEPVSLL VMPSCLGMPQ GRLVSPYYQQ
QLGLLLGQHP VWLLENDLDS ELCYDGPPST RLRDWIDPRW LLVMGTFEAA VGAEAPYAYL
LSRDTVLAKA FAERAFRLAP LRLQALAHML GKGEIETQLV QQRTDLQRRT QYLAHVLQSQ
FGQRVVFDMP QGGQMLWVSF CQPLAWDGIA AALAGSALHA LPGEQFGLPG HYPQHLALIW
LGGRPDELQL AVRRLAQALE VRCGRNTRFS S
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