| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2785 |
|---|
| Symbol | |
|---|
| ID | 5190996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3166106 |
|---|
| End bp | 3167497 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587235 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001268101 |
|---|
| Protein GI | 148547999 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGC TGAACCCGTC TAAAGGCTGG AGTTCTTCAA CCAGCCGCCT GCTGGCGCTG
TACAGCTTTC TGTTCGTGGC CTGGAGCAGC ATCCTCATGG GGGTGCTGTA CTTCGAGGTA
TCCAGCTACC TGAACAAACT CACCCGTCAC TCCATGCTGC AACGCCAGCA CCTGTTCGCC
CACATGAGCG GCAAGCAACT GGACGACGCC CTGATTGCCA GCCAGGCCTT CGAGGAGCGC
AGCTTTGACG CCTACGGCCT GTTCGATAGC CAGCTCAACC CGATTGGCGG CACCGTGCGG
GCCTTGCCCC CAGAACTCAG ACTGGACGGC AAGATCCATG AGTTGGAACG CTGCCTGGAT
GCCGACGACC CACGCATGCC CCGCGACAGC TGCGACGCGG TGGCAATCAA GGTACAGGAT
GGCCGGTGGC TGGTGCTGGT GCGTGACAAT GGCTCGCTGT TCGTGGTTAC CCGGATCATC
CTGCACGCCC TGCTCTGGGG CATCTCGCTG ACCCTGATCC CGGGTTTTGC CGGTTGGTAC
CTGCTACGGC GCAGGCCGCT CAAGCGTATA CGGGCGATCC AGGCCCAGGC CGAACTGATC
GTCGCCGGCG ACCTGACCCA CCGCCTGCCA CTGTCGGCCC GCCGCGACGA GCTGGACATG
CTTGCGGCGA TCGTCAATGC CATGCTTGAC CGTATCGAAC GGCTGATGCA TGAGGTCAAG
GGTGTATGCG ACAACATTGC CCATGACCTG CGCACACCGC TGACCCGCCT GCGCGCCCAG
CTGTACCGTA TTCGCCAGCA AAGCGACGTG GATTCTGCGC AAGCCGAAGC GCTGGACCAG
GCCATCGGCG AAACCGACAC CTTGATGGCG CGCTTTCGCG GGTTGTTACG CATCAGCGAG
CTGGAAGACC GCCAGCGCCG CGCCGGCTTC GTCCAGCTTG ACCCGCATGA ACTGCTGGTA
GAACTGCACG ATTTTTACCT GCCATTGGCC GAAGATGGTG GCATTCATCT GCAATTGCAC
CAACCTGCGC AGCTACCGGC ACTGCACGGC GATCGCGAGC TGCTGTTCGA GGCGTTGGCG
AATCTGGTGG GCAACGCGAT CAAGTTTACG CCCGAGGGTG GTCGGGTGCG CATAAGCGCC
ACGCTGGATG ACAACGGCGT GCACATGGCG ATCGAGGATA GCGGGCCAGG TATTCCCGAA
GAAGAGCGGA CGGCCGTACT GAAACGGTTC TATCGCAGCG ATGAAGGCCA CCGCCATGCC
GGCTTCGGGC TGGGGTTGTC GATCGTGGCG GCAATCGTCG ACCTGCATGG GTTCGGGCTG
GAGATTGGCG AAAGCGAATT GGGTGGGGCC AGGCTGGTAT TGCACTGCCC GCTTGCGGGC
CTAGTGAAGT AA
|
|---|
| Protein sequence | MPLLNPSKGW SSSTSRLLAL YSFLFVAWSS ILMGVLYFEV SSYLNKLTRH SMLQRQHLFA
HMSGKQLDDA LIASQAFEER SFDAYGLFDS QLNPIGGTVR ALPPELRLDG KIHELERCLD
ADDPRMPRDS CDAVAIKVQD GRWLVLVRDN GSLFVVTRII LHALLWGISL TLIPGFAGWY
LLRRRPLKRI RAIQAQAELI VAGDLTHRLP LSARRDELDM LAAIVNAMLD RIERLMHEVK
GVCDNIAHDL RTPLTRLRAQ LYRIRQQSDV DSAQAEALDQ AIGETDTLMA RFRGLLRISE
LEDRQRRAGF VQLDPHELLV ELHDFYLPLA EDGGIHLQLH QPAQLPALHG DRELLFEALA
NLVGNAIKFT PEGGRVRISA TLDDNGVHMA IEDSGPGIPE EERTAVLKRF YRSDEGHRHA
GFGLGLSIVA AIVDLHGFGL EIGESELGGA RLVLHCPLAG LVK
|
|---|
| |