| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2666 |
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| Symbol | |
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| ID | 5191375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3045831 |
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| End bp | 3048296 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587118 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001267984 |
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| Protein GI | 148547882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0970775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTA CCCGCCAAGA TACGCTTCCG GTAATCCGCA ACCTCGCCGA TTTCGACCCA
CGCTCGGGCA ATTGCCTCGA ACGCCTGGTG TTCAACCATC GCTGGCCATT TCTGCTGTGC
ATGCTGCTGG CAACGTTGGT GCTGGGCTTC ATGGCGGCGA CGCGCCTGGA GCTGCGCCCC
AGCTTTGACA AAATGCTGCC GCAGAGCCAC CCCTACATAC AGAACTACCT GGGAAACCGC
GCTTCGCTGC GCGGATTGGG CAATGCGGTA CGGGTGGTGG TAGAGAACAC CCACGGTGAT
ATCTTCGACC CGGGTTACCT GCAGACCCTG CGCCATATCA ACGACGAACT GTTCCTCAGC
CAAGGCGTGG ACCGGGCATG GGTGAAGTCC TTGTGGAGCC CGGCGGTGCG ATGGACCGAG
GTAACCGAGG AGGGTTTCCA GGGCGGGCCG GTCATGCCTG ACGGGTATCA AGGCGCAGCC
GGTGATATCG AACAGCTAAG GCAGAACATC GAGCGTGCCA ACATCGTCGG CAGCCTGGTA
GCGCGCGACT TCAAGTCGAG CATGCTGGTG GTGCCGCTGC TGGACCAGGA CTCAGCCACC
GGCAAAGGCC TGGACTACCA TGCCTTTTCG CAAAAGCTCG AACAGTTGCG CAGTCAGTAC
CAGGCCAGCG GCCAGTACCG CATTCATGTG ATCGGCTTCG CCAAGCTGAT GGGCGACCTG
ATCGACGGCC TGATCCAGGT GATGGCGTTC TTTGCGCTGG CTGTGCTGAC CAGCCTGGTG
ATCATCTACT GCTACACCCG CTGTGTACGC AGCACCTTGC TGGTGGTGGT GTGTTCGCTG
ACTGCAGTGG TATGGCAGCT GGGTATCGTT GCCTGGCTGG GCTATGCCAT CGACCCGTAT
TCGATCCTGG TGCCGTTCCT GATCTTTGCC ATCGGCGTGT CGCACGCGGC GCAGAAGATG
AACGGCATCC TTCAGGACAT AGGCCGCGGT ACGCACCGGC AGATTGCCGC CCGCTATACC
TTCCGCCGCC TGTTCGTGGC CGGGGTCACC GCACTGCTGG CCGATGCCGT GGGCTTTGCG
GTGCTGATGC TGATCGATAT TCCGGTGATC CAGGACCTGG CAATCACCGC CAGCATTGGT
GTGGCGGTGC TGATTTTTAC CTCGTTGCTG TTGATGCCGG TGGCACTGTC CTATGTCGGT
GTGGGCCGTA AGGCGGCCGA GCGAGCGCTA CGTATCGATG CCCGCGCGGA TCAGCACTGT
GGCTTCGGCC GGCTGTGGGC CCTGCTTGAC CGATTCACCG AACGCAAGTG GGCCAGCGCT
GCATTGCTGG CTGCCCTGGT GCTGGCCGCC CTTGGCACCT GGGGTAGCCT CCAGCTGAAA
ATCGGTGACC TCGACAGTGG CGCCCCCGAG CTGCGTGCGG ACTCGCGCTA CAACCTCGAC
AACGCTTACA TCACCCAGCA TTACGCACTG TCCAGCGATA CCTTCGCGGT CATGGTCAAG
ACGGCCCCCG AAGGCTGCCT GCAATACCAG ACATTGATCC TCGCCGACCG CCTGGCCTGG
GAGCTGCAGC AACTGCCGGG TGTGCAGACC ACCGTGTCGC TGGCAAACGC GGTGCGCCAG
ATCACTGCGG GTACCTACGA AGGCAACGCG CGCCTGAACA GCCTGCAGCG CAACCAGGAC
GTGCTCAACT ACGCCGCCCA GCAAGCCTCG GTCAACGCCC CGGAGCTGTT CAACAACGAC
TGTTCGCTGA TGCCGGTGAT CGCCTACCTC AAGGACCACC GCGCCGACAC GCTGGCCCAG
GTGGCTGTAG CGGCTGAGCG TTTCGCCCAG GCCAACAGCA ATGCTGACCA CCAATTCCTG
CTGGCCGCCG GCAGCGCCGG CATCGAGGCC GCCACCAACG AGGTGGTGCG CGAGGCCAAC
CACCGCATGC TGTTGCTGGT GTACCTGGCG GTGACCCTGT TCTGCCTGGT CACCTTCCGC
AGCTGGCGAG CGACGCTGGT GGCAATCCTG CCGCTGATGC TTACCTCGGT GCTGTGCGAG
GCGTTGATGG TGGCCATGGG CATCGGCGTC AAGGTCGCCA CCTTGCCGGT GATCGCCCTG
GGGGTGGGCA TTGGCGTGGA CTACGCGCTG TACCTGCTCA GCGTGCAGTT GCACTACCAG
CGCGCCGGCC TGAGCCTGGC CCACGCCTAC CAGAAAGCCC TGGCCTTCAC CGGTCGGGTG
GTGGGGCTGG TCGGTATCAC CTTGGCCGCT GGCGTAGCCG GCTGGGCCTG GTCGCCAATC
AAGTTCCAGG CCGACATGGG CCTGCTGCTG ACCTTCATGT TCCTGTGGAA CATGCTCGGC
GCGCTGGTGC TGATACCCGC GTTGTCGCAC TTCCTCCTGC GCGGCCAGGG CGCCCCGGCA
GCTGCCGATG CCCAGGCGCC GGCGCTTTCG CAAACCCAAG CAACCGAGTG CTCGCCTCAT
GTCTGA
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| Protein sequence | MAATRQDTLP VIRNLADFDP RSGNCLERLV FNHRWPFLLC MLLATLVLGF MAATRLELRP
SFDKMLPQSH PYIQNYLGNR ASLRGLGNAV RVVVENTHGD IFDPGYLQTL RHINDELFLS
QGVDRAWVKS LWSPAVRWTE VTEEGFQGGP VMPDGYQGAA GDIEQLRQNI ERANIVGSLV
ARDFKSSMLV VPLLDQDSAT GKGLDYHAFS QKLEQLRSQY QASGQYRIHV IGFAKLMGDL
IDGLIQVMAF FALAVLTSLV IIYCYTRCVR STLLVVVCSL TAVVWQLGIV AWLGYAIDPY
SILVPFLIFA IGVSHAAQKM NGILQDIGRG THRQIAARYT FRRLFVAGVT ALLADAVGFA
VLMLIDIPVI QDLAITASIG VAVLIFTSLL LMPVALSYVG VGRKAAERAL RIDARADQHC
GFGRLWALLD RFTERKWASA ALLAALVLAA LGTWGSLQLK IGDLDSGAPE LRADSRYNLD
NAYITQHYAL SSDTFAVMVK TAPEGCLQYQ TLILADRLAW ELQQLPGVQT TVSLANAVRQ
ITAGTYEGNA RLNSLQRNQD VLNYAAQQAS VNAPELFNND CSLMPVIAYL KDHRADTLAQ
VAVAAERFAQ ANSNADHQFL LAAGSAGIEA ATNEVVREAN HRMLLLVYLA VTLFCLVTFR
SWRATLVAIL PLMLTSVLCE ALMVAMGIGV KVATLPVIAL GVGIGVDYAL YLLSVQLHYQ
RAGLSLAHAY QKALAFTGRV VGLVGITLAA GVAGWAWSPI KFQADMGLLL TFMFLWNMLG
ALVLIPALSH FLLRGQGAPA AADAQAPALS QTQATECSPH V
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