Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2590 |
Symbol | |
ID | 5193390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2951040 |
End bp | 2951597 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640587043 |
Product | polysaccharide export protein |
Protein accession | YP_001267909 |
Protein GI | 148547807 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCGTT CAATGTTTGC CGCTTTCTGC ATGCTGACGG TGTGGTCTGG TGCCGGTAAC GCCGACCAGA GCAGTGCTGC TTACCTGCTC AGCCCCGGCG ATGTGGTGAT GGTATCGGTG TGGCAGGAAG ACAGCCTGCG TCAAGAAGCC ACCGTACTTC CCGATGGTAG TATCACCTTC CCCTTGGCCG GGCGCATCAA TGTTGCCGGG CTGGACGTGA CGGCAGTCGA AAAGCAGGTC GCTGCCAAAC TCGAAAAATT CCTCCCCGAC CCTAACGTCA GCGTTGTCGT CAAAAGCATT GCCGGCAACA TGGTCTATGT ACAGGGCAAA GTGATCAAGC CCGGGCCTGT GCAAATGGCA GGCCCCACGG CCGTATTGCA GGCGCTGAGC ATGTCGGGCG GCCTGGACAA GTTTGCGGAT GAAAGCGAAA TCAAGGTGGT CCGCGGCACC GGTGCTTCCC AAAAGATCCT GCCCGTGCGA TATAAGGACC TGGTGTCTGG GCGGGACATG TCCACCAACA TCCAACTTCA GGCTGGCGAT ACGCTGGTCG TTCCTTGA
|
Protein sequence | MVRSMFAAFC MLTVWSGAGN ADQSSAAYLL SPGDVVMVSV WQEDSLRQEA TVLPDGSITF PLAGRINVAG LDVTAVEKQV AAKLEKFLPD PNVSVVVKSI AGNMVYVQGK VIKPGPVQMA GPTAVLQALS MSGGLDKFAD ESEIKVVRGT GASQKILPVR YKDLVSGRDM STNIQLQAGD TLVVP
|
| |