Gene Pput_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2590 
Symbol 
ID5193390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2951040 
End bp2951597 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID640587043 
Productpolysaccharide export protein 
Protein accessionYP_001267909 
Protein GI148547807 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTT CAATGTTTGC CGCTTTCTGC ATGCTGACGG TGTGGTCTGG TGCCGGTAAC 
GCCGACCAGA GCAGTGCTGC TTACCTGCTC AGCCCCGGCG ATGTGGTGAT GGTATCGGTG
TGGCAGGAAG ACAGCCTGCG TCAAGAAGCC ACCGTACTTC CCGATGGTAG TATCACCTTC
CCCTTGGCCG GGCGCATCAA TGTTGCCGGG CTGGACGTGA CGGCAGTCGA AAAGCAGGTC
GCTGCCAAAC TCGAAAAATT CCTCCCCGAC CCTAACGTCA GCGTTGTCGT CAAAAGCATT
GCCGGCAACA TGGTCTATGT ACAGGGCAAA GTGATCAAGC CCGGGCCTGT GCAAATGGCA
GGCCCCACGG CCGTATTGCA GGCGCTGAGC ATGTCGGGCG GCCTGGACAA GTTTGCGGAT
GAAAGCGAAA TCAAGGTGGT CCGCGGCACC GGTGCTTCCC AAAAGATCCT GCCCGTGCGA
TATAAGGACC TGGTGTCTGG GCGGGACATG TCCACCAACA TCCAACTTCA GGCTGGCGAT
ACGCTGGTCG TTCCTTGA
 
Protein sequence
MVRSMFAAFC MLTVWSGAGN ADQSSAAYLL SPGDVVMVSV WQEDSLRQEA TVLPDGSITF 
PLAGRINVAG LDVTAVEKQV AAKLEKFLPD PNVSVVVKSI AGNMVYVQGK VIKPGPVQMA
GPTAVLQALS MSGGLDKFAD ESEIKVVRGT GASQKILPVR YKDLVSGRDM STNIQLQAGD
TLVVP