| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2577 |
|---|
| Symbol | |
|---|
| ID | 5191307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2935872 |
|---|
| End bp | 2936849 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640587030 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001267896 |
|---|
| Protein GI | 148547794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG TGATCGGGGT GGTGGTAATC GGCCGCAATG AAGGCCAGCG CCTCGAGCGC
TGCCTTGTTT CGCTGGCGCA CGGGGCCGAC AAAGTCATGT ACGTCGACTC GGGTTCCACC
GATGGTTCGC TGCAGTTGGC CGCCAACCTT GGCGTGGCAG TACTGGCGCT GGACATGAGT
ATCCCGTTCA CCGCCGCACG CGCCCGCAAT GAGGGTTTTG CCGCCTTGCA GCGCCTGTTG
CCATCAATGC AACTGGTACA GTTCGTCGAT GGTGACTGCG AGGTGAATGC CAGCTGGCTG
GCCACGGCGC AGGCTTTTCT TGAGCAGCAC CCCGCCGTGG CAGTGGTGTG TGGTCGCCGG
CGTGAGCGCT TTCCGCAGCG GTCGGTGTAC AACTTGCTGT GCGACCTGGA GTGGGATACC
CCGGTCGGTG AGGCCAAGGC CTGTGGCGGC GATGCACTGA TGCGGGCAGA CGCTTTTGCA
GCTGTGGGTG GCTTCCGGCC TGACCTGATT GCCGGAGAAG AGCCTGAACT GTGTGTGCGT
TTGCGGGCCA ACGGCTGGAA AATCTGGCGA CTGGCTGCCG AGATGACCCT GCACGATGCC
GGCATGACCC GTTTCAGCCA GTGGTGGCGG CGTAGCCTGC GTGCTGGGCA CGCCTATGCC
GAGGGCGCCT ACCTGCATGG CCAGCCACCC GAGCGGCATT GGCTGCGTGA GTCACGTCGG
GCCTGGTTGT GGGGCCTGGG CATACCCTTG GTGATCGCGC TGGCCTGCCT GCTGCTGGGC
GGCTGGGGCC TGCTCTTGCT GTTGATCTAC CCACTGCAGG CCGTGCGCCT GGCCCGCCGC
GGCGGCAAGT CGACGCGCGA GAACTGGCTG CAGGCTGTGT TTCTGGTGTT GGGCAAATTC
CCGGAAATGC TCGGCCAGCT GAAGTTCCTG CGCCACCGCC TTGCGGCTGG CAAATCGGCT
TTGATCGAGT ACAAGTGA
|
|---|
| Protein sequence | MATVIGVVVI GRNEGQRLER CLVSLAHGAD KVMYVDSGST DGSLQLAANL GVAVLALDMS
IPFTAARARN EGFAALQRLL PSMQLVQFVD GDCEVNASWL ATAQAFLEQH PAVAVVCGRR
RERFPQRSVY NLLCDLEWDT PVGEAKACGG DALMRADAFA AVGGFRPDLI AGEEPELCVR
LRANGWKIWR LAAEMTLHDA GMTRFSQWWR RSLRAGHAYA EGAYLHGQPP ERHWLRESRR
AWLWGLGIPL VIALACLLLG GWGLLLLLIY PLQAVRLARR GGKSTRENWL QAVFLVLGKF
PEMLGQLKFL RHRLAAGKSA LIEYK
|
|---|
| |