| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2548 |
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| Symbol | |
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| ID | 5191979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2901818 |
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| End bp | 2903017 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640587001 |
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| Product | benzoate transporter |
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| Protein accession | YP_001267867 |
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| Protein GI | 148547765 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC TGATCAAGGA CTGCTCTGTG TCGGCCATCG TCGCCGGCAG CATTGCCACG
ACGATCTCTT ACGCCGGCCC GTTGGTGATC ATTTTCCACG CCGCCGAAGC GGCCGGCCTG
TCGCACCAGC AGTTGTCATC CTGGGTCTGG GCCGTGTCCA TGGGCAGTGC GGTGCTCGGT
GCGCTGCTCA GCCTGCGCTA CCGCGTGCCG GTAGTGATCG CCTGGTCGAT CCCGGGGTCG
GCGCTGTTGG TCACCGCCTT GCCGCAACTG GGCCTGGCGC AGGCCGTGGG CGCCTACCTG
GTGGCCAACC TGGTCCTGCT GCTGATCGGC ATCAGCGGGG CCTTCGACCG CATCATCGCG
CGCCTGCCGG GTTCTATCGC TGCCGGTATG CAGGCCGGGA TCCTGTTCAG TTTTGGCATC
GAGGTGTTCC GCGCCTTGCC GGTGCAACCG CTGCTGGTAC TGGCGATGTT CGTCACCTAC
GTGCTGATGC GTCGGGTGCA GCCGCGCTAT GCCGTGGCTG CGGTGCTGGG CGTGGGCATG
CTGGTGACCG TGGCCGGCGG TACGTTGCGC AGCGAGGCAC TGGTGCTGGA ACTGGCCTCA
CCCCAGTGGG TCACCCCCCA GTTCAGCCTG TCGGCGGTAT TCAGCCTGGC GCTGCCGATG
GTGCTGGTGG CGCTGACCGG GCAATTCATG CCGGGTATGG CGGTACTGCG CAACGCTGGC
TACCCCACGC CGGCCAGCCC GCTGATCAGC GCCAGTGCCC TGGCTGGGGC GCTTCTGGCG
CCGTTCGGTT GCCACGGGCT GAACCTGGCG GCGGTTACCG CCAGCCTGTG CACCGGCCAT
GAAGCCCATG AAAACCCGCA ACGGCGCTAT GTGGCCGCGG TGGCTGGCAG TGTGTTGTAC
CTGCTACTGG GCATTGCCGG GGCCACCTTG ATGTCGCTGT TCGCCGCCTT TCCCGCCGTC
CTGATCGCGG CCCTGGCCGG TTTGGCCCTG TATGGCGCCA TCAGCGAAGC CTTGGTCCGC
AGCCTGGCAG AACCGGCCGA GCGCGACGCC GGGCTGTTCA CCTTCCTGGT CACCGCTTCG
GGGGTGGCTT TCCTGGGCCT GTCGGCGGCG TTCTGGGGGC TGCTGTTCGG CCTGCTGGCG
CACGCACTGC TGAGGCTGCG CCAACCACGT GCCCGGGAGG TGCTGCGCCG TATCCCATGA
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| Protein sequence | MKTLIKDCSV SAIVAGSIAT TISYAGPLVI IFHAAEAAGL SHQQLSSWVW AVSMGSAVLG
ALLSLRYRVP VVIAWSIPGS ALLVTALPQL GLAQAVGAYL VANLVLLLIG ISGAFDRIIA
RLPGSIAAGM QAGILFSFGI EVFRALPVQP LLVLAMFVTY VLMRRVQPRY AVAAVLGVGM
LVTVAGGTLR SEALVLELAS PQWVTPQFSL SAVFSLALPM VLVALTGQFM PGMAVLRNAG
YPTPASPLIS ASALAGALLA PFGCHGLNLA AVTASLCTGH EAHENPQRRY VAAVAGSVLY
LLLGIAGATL MSLFAAFPAV LIAALAGLAL YGAISEALVR SLAEPAERDA GLFTFLVTAS
GVAFLGLSAA FWGLLFGLLA HALLRLRQPR AREVLRRIP
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