| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2544 |
|---|
| Symbol | |
|---|
| ID | 5192706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2897298 |
|---|
| End bp | 2898278 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586997 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001267863 |
|---|
| Protein GI | 148547761 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.154645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAC TGTCCGTACT GGATCTGGTC ATGATCGGCG AAGGCAAGAC CTTCGCCGAT
GCGATCGAAG AATCCCGCCA GCTGGCGCGG CATGTCGAGC AACAGCACTA CCGCCGCTAC
TGGATCGCCG AACACCATGA CATGCCGGGC ATTGGCTCGG CTGCCACTTC GCTGGTGATC
AACGAAATCG CCAACGCCAC CCGACACATT CGTGTGGGGG CTGGCGGCAT CATGCTGCCC
AACCATGCGC CGTTGGTGGT GGCCGAACAG TTTGGCACCC TCGATACATT GCACCCGGGC
CGTATCGACC TGGGCCTGGG CCGTGCGCCA GGCACGTCCG GGCCGACCGT GCGTGCATTG
CGCGGCGCCG CGCCAGAGCG AGATTTCAGC CAGGACATCG CCGAGCTGCG TGATTACCTG
GCGGACAACG GCAAACGCCG GGTGCGCGGC GTACCGGGTG CGCACGATGT GCCGGTGTGG
ATCCTCGGTT CCAGCCTGTT CGGTGCTGAC CTGGCGGCGA AGCTGGGCCT GCCTTATGCC
TTCGCCTCGC ACTTTGCCCC GCGTTACCTG CTGCAGGCCA TTGCCCATTA CCGCGCCAAC
TTCCAGCCTT CCGCGCAACT GGCCAAACCG TATGTGATGG TTGGCATGAA CCTGTTCGCC
GCTGCCAGCG ATGCTGAGGC GGACTACCTG GCCAGCTCCC ACCGCAAGTG GATGCTGGAC
CTGCATGTCG GGCGCTTTGG CTTGCTGCCC AAGCCGCAAG AGGGTTACAT CGAACGCTTG
CCGGACCACG AGCGCGCCGT GCTCGAGCAG GTGATGGCCT GCACCGTAGC CGGAGGGCCT
GAACGGGTGA GGGAAGGGCT GCGCTCGCTG ATTGAGCAGA CCGGGGCGGA CGAGCTGATG
ATCGACTGCC GCATCCATGA CCCGCTGGCG CGGCAGCGGT CACATGCCTA TGCAGCGCAG
GCGTTGGCTG AACTGGGCTG A
|
|---|
| Protein sequence | MTALSVLDLV MIGEGKTFAD AIEESRQLAR HVEQQHYRRY WIAEHHDMPG IGSAATSLVI
NEIANATRHI RVGAGGIMLP NHAPLVVAEQ FGTLDTLHPG RIDLGLGRAP GTSGPTVRAL
RGAAPERDFS QDIAELRDYL ADNGKRRVRG VPGAHDVPVW ILGSSLFGAD LAAKLGLPYA
FASHFAPRYL LQAIAHYRAN FQPSAQLAKP YVMVGMNLFA AASDAEADYL ASSHRKWMLD
LHVGRFGLLP KPQEGYIERL PDHERAVLEQ VMACTVAGGP ERVREGLRSL IEQTGADELM
IDCRIHDPLA RQRSHAYAAQ ALAELG
|
|---|
| |