| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2540 |
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| Symbol | |
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| ID | 5191572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2891954 |
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| End bp | 2893282 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586993 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001267859 |
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| Protein GI | 148547757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACA GCCCCGCCCC TGACCAAGGC ACGGACACCA CCCGCAACGC GCTGTACCGG
CGCATCACCT TGCGGCTGAT TCCGTTCATT TTCATCTGCT ACCTGTTCAA CTACCTGGAC
CGCGTCAACG TCGGCTTTGC CAAGCTGCAG ATGCTCGACG CCCTTAAATT CAGCGAAACG
GTGTACGGCC TTGGCGCCGG CATCTTCTTC ATCGGCTATG TACTGTGTGG CCTGCCAAGC
AACCTGGCCC TCAATCGCTT CGGCCCACGG CGCTGGATCG CGCTGATGAT GATCGCCTGG
GGCAGCCTGT CCACCTGCCT GCTGTTCGTC ACCACCCCTA CCGAGTTCTA CACCCTGCGC
CTGCTCACCG GCGCTGCCGA AGCCGGCTTC TTCCCGGGTG TGGTGCTGTA CCTCTCGCGC
TGGTTCCCGG CGGCCCGGCG CGGCCGCATC ATGGCCCTTT TCATGTCGGC GATCCCGGTA
TCGGGCCTGC TTGGCGGGCC GTTCTCCGGC TGGATCCTCG AACATTTCGC CGCCGGCCAG
CACGGCCTGG CCGGCTGGCA GTGGATGTTC CTGATCCAGG GCCTGCCGAC CGTGGCCTTG
GGCGTATTGG CGGTGTTCCT GCTCAGTGAC GGCTACCAGA AAGCCGCCTG GTTGAGCCCG
GCTGAACGTC AGCTGATCGC TGCCGACCTG CAGGCCGATG CTGCAAGCAA ACCGAGCACC
ACCAGCGACA GCGTGCTGGC CGTGTTGACC AACCCGCTGA TCTGGACCTT CGGCTTCGTC
TACTTCTGCA TCCAGAGCGG TGTATACGCG ATCAACTTCT GGCTACCCTC GATCATCAAG
AGCATGGGCT TCGACAACCC GCTGCTGATC GGCTGGCTCA GCGCCATCCC GTACCTGCTG
GCGGGTGTGT TCATGATCCT TTGCGGGCGC TCGGCCGACC TGCGCAACGA GCGCCGCTGG
CACCTGGTGG TGCCAATGCT GATGGGCGCC GTCGGCCTGC TGATTGCGGT GAACTTCGCC
GGCAACCCGA GCATTGCCAT TCTTGGCTTG TCGATCGCCA CCATGGGTGC GCTTACCGGC
CTGCCGATGT TCTGGCCAAT GCCGACTGCG CTGCTCAGTG CCAGTGCCGC CGTGGCAGGT
CTGGCGATCA TCAACTCGGT GGGCCAGATG GCAGGGTTCC TCAGCCCGTA CCTGGTCGGG
TTCATCAAGG ACCAGACCGG TTCAACCGAT GCCGCACTGT ATTCGCTCGC CGCGTTGATC
GTACTGGGTA GCCTGGTGGC CTTGCGTGTA ACGCGAGCGG GTTCGCTGAG TACTGCACGG
GTGAGTTGA
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| Protein sequence | MAHSPAPDQG TDTTRNALYR RITLRLIPFI FICYLFNYLD RVNVGFAKLQ MLDALKFSET
VYGLGAGIFF IGYVLCGLPS NLALNRFGPR RWIALMMIAW GSLSTCLLFV TTPTEFYTLR
LLTGAAEAGF FPGVVLYLSR WFPAARRGRI MALFMSAIPV SGLLGGPFSG WILEHFAAGQ
HGLAGWQWMF LIQGLPTVAL GVLAVFLLSD GYQKAAWLSP AERQLIAADL QADAASKPST
TSDSVLAVLT NPLIWTFGFV YFCIQSGVYA INFWLPSIIK SMGFDNPLLI GWLSAIPYLL
AGVFMILCGR SADLRNERRW HLVVPMLMGA VGLLIAVNFA GNPSIAILGL SIATMGALTG
LPMFWPMPTA LLSASAAVAG LAIINSVGQM AGFLSPYLVG FIKDQTGSTD AALYSLAALI
VLGSLVALRV TRAGSLSTAR VS
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