Gene Pput_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2502 
Symbol 
ID5192449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2850564 
End bp2851607 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID640586955 
Producthypothetical protein 
Protein accessionYP_001267821 
Protein GI148547719 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG TTCAGGACTT CAACCTGACC ACCCTTGACC GCCTTTTACG CGCCTTTGGC 
GAACGCCAGC TACCGCTCAA CCTCGATACC CAATTGCCGC AACTGATCCA GGCGCTGCAA
GCTGATCACC TCGACCTGCT ACCGTTGCCG GGGCAAGGCA ACACCTTGCG TCGCTGGCAG
ACCTTGGCAC GGGTGGCCGG CTGTGACCTG GCACTGGCCA AGCTCTATGA GGGCCATACC
GATGCCTTGG CGATCCTGGC GGAATGCGGC GCAGCGCACC ACGCCAACGA CGGCATCTGG
GGCGTATGGG CGGCAGAGCC GCCCGATGCG CGGGTCCACA TCACTGCGCG TGAAGGCGAC
CAGGTGCGCC TGAGTGGCAC CAAGGCCTGG TGTTCCGGTG CCTTGCAGAT CGATCGCGCG
CTGATTACTG CCTGGGATGA GGCCGAGCAG CCGCAATTGG TGGCAATTGA GCTGTCGCAG
CCGAGCCAGG GCCTGAACAT CGAGCACTGG CAGGCCGTTG GCATGGCCAC TACCGCCAGT
GTCGAGGTGG CGTTCAACGA TACCCCAGGC ACGCTCATCG GCACGCCGGG CCAATACCTC
TCGCGCCCTG GCTTCTGGCA AGGCGGTGCA GGTATCGCTG CCTGCTGGTA CGGCGCGGCC
GAGGCGCTGG CGGATTACCT GCGTGAACAG TGCCGCAAAC CCCGCCCAGA CCCGCATGCC
GATGCGCATC TGGGCGCTGT GGATGCTGCG TTGCATGGCG CCCGTGCGTC ATTGCGTGAA
TGTGCTGCCT GGATCGATCA GCAGCCCGGT GTGGATGCCA GTTTCGAAGT TCGCCGCACC
CGCGCCCAGG TAGAACAGGC CGTAGAGCAG GTTATCAGTC ACGTCGGGCG TGCCTTGGGG
GCCACGCCGT TCTGTCGCAG CAGTCATTTT GCCCGGCTGA GCGCCGACCT GCCGGTGTTC
CTGCGTCAGA GCCACGCCGA GCGCGATCTG GCGATGCTGG GCCAGCAGTT GGCCCAGTTG
CCAGCCGGGG TGTGGCAACT ATGA
 
Protein sequence
MSIVQDFNLT TLDRLLRAFG ERQLPLNLDT QLPQLIQALQ ADHLDLLPLP GQGNTLRRWQ 
TLARVAGCDL ALAKLYEGHT DALAILAECG AAHHANDGIW GVWAAEPPDA RVHITAREGD
QVRLSGTKAW CSGALQIDRA LITAWDEAEQ PQLVAIELSQ PSQGLNIEHW QAVGMATTAS
VEVAFNDTPG TLIGTPGQYL SRPGFWQGGA GIAACWYGAA EALADYLREQ CRKPRPDPHA
DAHLGAVDAA LHGARASLRE CAAWIDQQPG VDASFEVRRT RAQVEQAVEQ VISHVGRALG
ATPFCRSSHF ARLSADLPVF LRQSHAERDL AMLGQQLAQL PAGVWQL