| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2477 |
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| Symbol | |
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| ID | 5193473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2826368 |
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| End bp | 2827885 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586930 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001267796 |
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| Protein GI | 148547694 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC TCGCAAGCAA TGTGCAGGTG GCGGTGATCG GTGCCGGCGC CATGGGCGCC
GGTATCGCCC AGGTTGCGGC CCAGGCCGGC CACCCCGTCA AGCTCTACGA CAACCGCCCG
GGTGCGGCCG CCCAGGCGGT GACGGGTATC GATCGCCAAC TGGCCCGGCT GGTGGACAAA
GGAACGTTGC TGGCCGCTGA ACGTGAAGCG ATCAATGCCC GCCTGTGCCC GGTCGATACA
CTCGACGCCT TGGCAGATGC CGGCCTGGTC ATTGAAGCCA TCGTCGAAAA CCTGCAGGTG
AAGCAGGCGT TGTTCGGCCA GCTCGAAACC CTGTGCGCAG CCGACTGTAT CCTTGCCAGC
AACACTTCGT CACTGTCCAT CACCAGCCTC GCCGCTGGCC TTGAACGCCC GCAGCACGTG
GTGGGTATGC ACTTCTTCAA CCCGGCACCG CTGATGGCGC TTGTCGAGGT GGTGTCGGGC
CTGGCAACCG ACCCGGCAGT GGCCGCATGC ATCTACGCCA CTGCCCAGGC CTGGGGCAAG
CAGCCGGTCC ACGCACGCTC TACACCGGGT TTCATCGTCA ACCGTGTAGC GCGGCCGTTC
TATGCCGAAA GCCTGCGCCT GCTACAGGAA GGTGCCGCCG ATTGCGCCAG CTTGGATGCG
CTGATGCGTG ACGCTGGCGG CTTTCGCATG GGGGCGTTCG AGCTGACCGA CCTGATTGGT
CATGACGTCA ATTACGCTGT CACGTGTTCA GTATTCGATG CTTTCTATGG CGATTTCCGC
TTCCAGCCTT CGCTGGTGCA GAAGGAACTG GTGGACGCCG GTCGCCTGGG GCGCAAGACC
GGCCAAGGCT TCTATCGCTA TGCCGAAGGC GTCGAGCGTC CGCAGGCGGC CGAACTGCAC
AGCTTCGCCG GCGCAGAGGC CTGCGTTGTC GAGGGCAACC TGGGGGTGAT GCAGCCGCTG
GTCGAGCGGC TTCGCCAAAG CGGCATTGCC GTGACCCAAC GCGCCGGTAG TGGCTTGATT
CAGGTGGGCG ATGCCACCCT GGCCCTGTCC GATGGCCGCC TGGCCAGCCA GCGTGCCCGC
GAAGACGGCC TGCGCAACCT TGTGCTGCTC GACCTGGCGC TGGACTACAG CAGCGCCACC
CGCCTTGCCA TCAGTTGGTC CGCCGATACC ACTGACAGCG CCCGCGACCA AGCCGTAGCC
TTGCTGCAGC GTGCCGGCCT GAAAGTGACC GGTGTCGCCG ACCTGCCCGG CCTGGTGGTA
CTGCGCACCG TGGCAATGCT CGCCAACGAG GCCGCCGATG CGGTGCTTCA GGGCGTCGGC
AGCGCCGCCG ACATCGACCT GGCCATGCGC GCCGGCGTCA ATTACCCGTG CGGCCCGCTG
GCCTGGGCGG CGAACATCGG TATTGCCCAT ACCCTGCGCG TGCTCGACAA CCTGCAGCGC
AGCTACGGCG AAAGCCGCTA CCGCCCTTCC CTGCTGTTAC GTCGCTGCGA AGCCAAAGGA
GGCACCCTGC ATGACTGA
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| Protein sequence | MAALASNVQV AVIGAGAMGA GIAQVAAQAG HPVKLYDNRP GAAAQAVTGI DRQLARLVDK
GTLLAAEREA INARLCPVDT LDALADAGLV IEAIVENLQV KQALFGQLET LCAADCILAS
NTSSLSITSL AAGLERPQHV VGMHFFNPAP LMALVEVVSG LATDPAVAAC IYATAQAWGK
QPVHARSTPG FIVNRVARPF YAESLRLLQE GAADCASLDA LMRDAGGFRM GAFELTDLIG
HDVNYAVTCS VFDAFYGDFR FQPSLVQKEL VDAGRLGRKT GQGFYRYAEG VERPQAAELH
SFAGAEACVV EGNLGVMQPL VERLRQSGIA VTQRAGSGLI QVGDATLALS DGRLASQRAR
EDGLRNLVLL DLALDYSSAT RLAISWSADT TDSARDQAVA LLQRAGLKVT GVADLPGLVV
LRTVAMLANE AADAVLQGVG SAADIDLAMR AGVNYPCGPL AWAANIGIAH TLRVLDNLQR
SYGESRYRPS LLLRRCEAKG GTLHD
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