Gene Pput_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2460 
Symbol 
ID5195122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2810350 
End bp2810910 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID640586913 
Productheat shock protein Hsp20 
Protein accessionYP_001267779 
Protein GI148547677 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0031555 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.623789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG TTGCCAAGAA AGTGCCTGTT ACCCCCGCCG CCCCCCAGCC AACCAAAGCT 
TCGCCGCCCA GCGTCGAACC TTCGGAGCTG TGGCGGCCCT TCCAGCAATT GCGCCATCAG
ATCGACAGCC TGTTCGAGGA TTTTGGACGG CGGCCGATGC GCATGCCGTT CAGCCACACA
CCGTTCGATG TCGAACCTTT CTGGCGGCGT GACCTGTTCA CCCACGGCAT GCCGGCCATG
GACATCAGCG AGCTGGCCGA GGAGTACCGC ATCAGCGCCG AGTTGCCTGG CGTGGATGCC
AAGGATATCG AGATCAAGCT CGTCAATGGC AACCTGTTGA TCCGGGGCGA GAAAAAGGAA
GAAGTGGACG AAAAACGCAA GGAATATCAC CTGTCCGAGC GCCATTACGG CAGCTTCGAA
CGGGTTTTCC AGCTGCCCCG TGGAGTCGAC GCCGAGAAAA TCGACGCCCA GTTCAACAAG
GGCGTGCTGC TGGTGCACCT GCCCAAACGT GCCGAAGCCA TCCATCCGGA AAAGGTGATT
CCGATCAAGA GCGGTAAATG A
 
Protein sequence
MSEVAKKVPV TPAAPQPTKA SPPSVEPSEL WRPFQQLRHQ IDSLFEDFGR RPMRMPFSHT 
PFDVEPFWRR DLFTHGMPAM DISELAEEYR ISAELPGVDA KDIEIKLVNG NLLIRGEKKE
EVDEKRKEYH LSERHYGSFE RVFQLPRGVD AEKIDAQFNK GVLLVHLPKR AEAIHPEKVI
PIKSGK