Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2460 |
Symbol | |
ID | 5195122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2810350 |
End bp | 2810910 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640586913 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001267779 |
Protein GI | 148547677 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0031555 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.623789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG TTGCCAAGAA AGTGCCTGTT ACCCCCGCCG CCCCCCAGCC AACCAAAGCT TCGCCGCCCA GCGTCGAACC TTCGGAGCTG TGGCGGCCCT TCCAGCAATT GCGCCATCAG ATCGACAGCC TGTTCGAGGA TTTTGGACGG CGGCCGATGC GCATGCCGTT CAGCCACACA CCGTTCGATG TCGAACCTTT CTGGCGGCGT GACCTGTTCA CCCACGGCAT GCCGGCCATG GACATCAGCG AGCTGGCCGA GGAGTACCGC ATCAGCGCCG AGTTGCCTGG CGTGGATGCC AAGGATATCG AGATCAAGCT CGTCAATGGC AACCTGTTGA TCCGGGGCGA GAAAAAGGAA GAAGTGGACG AAAAACGCAA GGAATATCAC CTGTCCGAGC GCCATTACGG CAGCTTCGAA CGGGTTTTCC AGCTGCCCCG TGGAGTCGAC GCCGAGAAAA TCGACGCCCA GTTCAACAAG GGCGTGCTGC TGGTGCACCT GCCCAAACGT GCCGAAGCCA TCCATCCGGA AAAGGTGATT CCGATCAAGA GCGGTAAATG A
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Protein sequence | MSEVAKKVPV TPAAPQPTKA SPPSVEPSEL WRPFQQLRHQ IDSLFEDFGR RPMRMPFSHT PFDVEPFWRR DLFTHGMPAM DISELAEEYR ISAELPGVDA KDIEIKLVNG NLLIRGEKKE EVDEKRKEYH LSERHYGSFE RVFQLPRGVD AEKIDAQFNK GVLLVHLPKR AEAIHPEKVI PIKSGK
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