| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2404 |
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| Symbol | |
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| ID | 5194512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2745904 |
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| End bp | 2747649 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640586861 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001267727 |
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| Protein GI | 148547625 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGA AGGCGCCCCT GCGCGACATG CAGTTCGTCC TGCAACACTG GCTGCGGGCC
GATCAGGCCT GGGCGCAATT ACCGGCATAT GCCGACGTCG ACCTCGACCT GGCGGCCCAG
GTACTGGAAG AGGCGGCCCG TTTCTGCGAG CAGGTACTGG CCCCTTTGAA CCGTTCGGGC
GATCGCCAGG GCTGCCAGAT GGAGGGCGGG GAAGTACGCA CCCCGGACGG ATTCCCGGCG
GCTTATCGCG CCTACGTCGA CGGTGGCTGG CCGTCGCTGG CATGCGCCCC GGCGCTTGGC
GGCCAAGGGC TGCCGTTAGT GCTGGAGGCG GCCTTGCAAG AGATGCTGTT CGGCAGCAAC
CACGGCTGGG CCATGTACAC CGGCATCGCC CACGGTGCCT ACCTGTGCCT GAAAGCCCAT
GCATCCGCCG AGCTGCAGGC GCGCTATCTG CCGGGCATCG TCAGTGGTGC CACCCTGCCT
ACCATGTGCC TGACCGAACC CCAGGCCGGC AGCGATCTCA GCCTGTTGCG CTGCCGCGCC
GTGCCCCTGG GCGACGGTGG CTACGCGGTC AGTGGCAACA AGCTGTTCAT CTCTGGCGGC
GAACACGACC TGACCCGCGA CATACTGCAC CTGGTGTTGG CCCGGTTGCC GGATGCGCCG
CCCGGCAACC GCGGGCTCTC GCTGTTGCTG GTGCCGAAAT GGCTGGAGGA TGGCCAGCGC
AATACACTGT ACTGCGACGG CCTGGAACAT AAGCTGGGCA TCCGGGGCAG CGCCACCTGT
GCACTGCGCC TGGAGGGGGC CCGGGGCTGG TTGATAGGCC AGCCCCATGG CGGCCTGGCC
GCGATGTTCG TGATGATGAA TTCCGCACGG CTGCATGTTG GCCTGCAAGG GCTGGGGCAT
GCCGAGGCCG CCTGGCAACA GGCCCGCGAT TATGCCCTGG AGCGGCGCCA GATGAGTGCC
CCGGGGCGGG CCAAGGGGGG CGTCCAGGGC GCCGACCCGA TCCACCTGTA CCCGGCCATG
CGTCGGGTCT TGCTGGAGTT GCGGGTGCGT ACCGAGGGGA TGCGCGCGCT GGCCTACTGG
ACGGCCCAGT GGCTGGAGAT CGCCGACGCC GCCGTCGAGC CTGCACAACG GGCGAAGGCC
GCGACATTGG TGGCGCTGTT GACCCCCATC GTCAAGGCGG CCTTCACCGA GCAGGGGTTC
AGCCTGGCAA GCCAGGCCCT GCAGGTGTTC GGTGGCTATG GCTACACCCA GGAGTTTGCC
ATCGAGCAGA CCTTGCGCGA CAGCCGCATC GCGATGATCT ACGAAGGCAC CAACGAAATA
CAGGCCAACG ACCTGATGCT GCGCAAGGTA TTGGGCGATG GGGGGGAAGG TTTCGCCCTG
CTGTTGGGTG AGTTGCGTGC CGAGGCCGCT GCGGACGCTG GCGCCGCCGC CGCCGCGTTG
GGCAGCGCGT GCGACACGCT GGAGGCCGTG CTGGCCAAGG TGCTGTCGAT GACCGCGGGC
GATCCCGAAT TTCCGTACCG CGCCGCAGGC GACTTCCTGC AGTTGTGCGC AACGGTGCTG
CAGGCCTTCG CCTGGGCCCG CAGCGCGCGC TGCATCCAGG CGTTGCCAGT GGGGTCGGCG
CAGCGTCGGG AAAAGCAGGA AAGCGGTGGG TTCTTCTTCA GCTACCTGCT GCCCGACCTC
GACCGGCAGG TGGCGGCCAT CGACGCGGCC GCCACGCCGT TGCCATTCAT TGCCGAATCG
TTCTGA
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| Protein sequence | MTWKAPLRDM QFVLQHWLRA DQAWAQLPAY ADVDLDLAAQ VLEEAARFCE QVLAPLNRSG
DRQGCQMEGG EVRTPDGFPA AYRAYVDGGW PSLACAPALG GQGLPLVLEA ALQEMLFGSN
HGWAMYTGIA HGAYLCLKAH ASAELQARYL PGIVSGATLP TMCLTEPQAG SDLSLLRCRA
VPLGDGGYAV SGNKLFISGG EHDLTRDILH LVLARLPDAP PGNRGLSLLL VPKWLEDGQR
NTLYCDGLEH KLGIRGSATC ALRLEGARGW LIGQPHGGLA AMFVMMNSAR LHVGLQGLGH
AEAAWQQARD YALERRQMSA PGRAKGGVQG ADPIHLYPAM RRVLLELRVR TEGMRALAYW
TAQWLEIADA AVEPAQRAKA ATLVALLTPI VKAAFTEQGF SLASQALQVF GGYGYTQEFA
IEQTLRDSRI AMIYEGTNEI QANDLMLRKV LGDGGEGFAL LLGELRAEAA ADAGAAAAAL
GSACDTLEAV LAKVLSMTAG DPEFPYRAAG DFLQLCATVL QAFAWARSAR CIQALPVGSA
QRREKQESGG FFFSYLLPDL DRQVAAIDAA ATPLPFIAES F
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