| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2397 |
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| Symbol | |
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| ID | 5194877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2735306 |
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| End bp | 2738353 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586854 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267720 |
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| Protein GI | 148547618 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG0739] Membrane proteins related to metalloendopeptidases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.584295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC TTTCCCACCC GGCACCTCGG TTTTCGGCAA GCGATGCAGA GGGCCTTGCA
AAAGATTTCT TCAATGTCAC CGGCACTGCA ACGCCCCTGG ATGGGGAGCG TGATCGCAAT
TATCGCCTGG AGACTGGCGT AGATGCAGGC TGGATACTGA AAATCGTCAA TGCCAGCGAG
CCCAGGGTAG AAAGCGAGTT TCAAACCGCG CTACTCGACC ACCTGGCCGT GCATGGCGCG
CATTTGGGCG TACCACACCT GCGGGCCAGC GTGACGGGCG ACTACCTGCC GTCTGTGGCC
AGCAGCACCG GTGAACAGCA CGCTGTGCGC CTGGTCAGCT GGCTGGCCGG CACGCCACTT
GCCAAGGCCA GACGCTCCCT GGCGCTGATG AGAAACTTCG GCCAGGCACT CGGTGAACTT
GACCGTGCGC TGCAGGGCTT CATGCACCCG GGCGCAGTCC GCGACCTGGA CTGGGACTTA
CGCCATGCTG CGCGCTCCCG TTCGCGGCTG CACTGCATCA AGGACCCTGA TCGCCGGGCC
GTTGCCGAGC GCTTCATCAC CCGGTTCGAG CAGACGGTAC AGCCTGAACT GGCTTCCCTT
CGGGCCCAGG TGATCCACAA CGATGCCAAC GACTGGAACA TCCTGGTCGA TGCCGAAACG
CCCCGTAACG TGACTGGCTT CATCGATTTT GGCGATGCCG TGCACACCGT TCTGATTGCC
GAGGTCGCAA TCGCCAGCGC CTACGCCATT CTCGACATGG ACGACCCGAT CGGCGCTGCT
GCTGCGCTGG TGGCCGGCTT CCATGAGAAG TACCCGTTGC AAGCGCAAGA GCTTGATGTG
TTGTTCAACC TGATTGCCAT GCGCTTGGTC ATCAGCGTCA CGTTCTCCGC TTCCCGGCAG
GACCAGACCG ACGACAACCC TTACCTGGCG ATCAGTGAAG CGCCTGCCTG GCGTCTACTG
GAACAGCTCG ATTCGATGAA CCCACGGTTG GCCACCGGCA TTCTGCGCAA GGCCTGTGGT
TTCGATGCCA TCGAAGGTGC GGGGGAAGTC CGCCGCTGGA TTGCTGACAA CCACAAGTCG
TTTGCCGATC TGGTGCGCCC GTCAGCCGCC ATTCTGGACA AGGTCATCGC GCCGTTTGGC
GATGCCAGCC ATGAGATGAC CATTGCCTCG GCCCAGCAGC GCCCTGCAGA TGCGACGCGG
TGGTGGAATG AATGCTCTGC CGCGCACAAG GCCCCGCTGG GCATCGGGCC ATGGGGCGAG
GTACGTGCCG TCTATACCGA CAGCGCCTTT GAGTCTCGCT TCATCAAGGG GCAGCACCGG
ACCCTGCATG TGGGGGTAGA TTTGCTGATG CCAGCGGGTA CGCCGCTGTA CGCACCGATT
GCCGGCACCG TCAGAAGCGT CGAGGTCGAG CCAGGCCCGC TGGGTTATGG CGGCCTGGTG
ATGCTCGAGC ATACCCCGCC CGGTTGCCCG CCATTTCTGA CACTGTGGGG GCACATGGCC
CACGAGGCGC TCAGCCGTTT GAAGGCCGGT GACAAGCTCG AAGCGGGCGA CCTCGTCGGT
TACATGGGCA GCGATCACGA GAACGGCGGC TGGATTCCCC ACCTGCATCT GCAGGTGGTC
ACCGATACTC AGTTGCGCGC GTGCGAGGTC ATTGGCGTGG GTGAGCCCGC GTACCGCGAA
GCGTGGGCCG ACCTGTTCCC CGATGCCTCG GCCCTGGCCG GTATCCCGCC AGAGACCTAC
AGCCAGCAGG GGATGACCAA GGCCCAGATC ATTGCCAGGC GCAAGGAACT GCTGCTACCC
AACCTGTCCA TTTCGTACAC CGACCCGATC AAGTTCGTGC GCGGTGATGG CGTATGGCTG
ATCGACAACT TCGGGCGGGC CTACCTGGAC TGTTTCAACA ACGTGTGCCA CCTGGGCCAT
AGTCATCCCG ACGTGGTCGA AGCCCTGACC CGCCAGGCTG CGCTGCTCAA CACCAATACC
CGCTACCTGC ACGACAACAT CGTCGAATAC GCCGAACGCC TGACCGGCAC TTTGCCCAAG
GGCCTTTGCG TAGCGTCCTT TGGCTGCTCG GGGAGTGAGG CCAACAGCCT GATGCTGCGT
ATGGCGCGCA ACTACACAGG CAGTGATCAG GCGATCGTGC TGGACTGGGC CTACCACGGC
ACCACTCAGG AACTGATCGA TCTGAGCCCT TACAAGTACA AGCGCAAGGC GGGCAAGGGC
AGGGCGGCGC ATGTTTACGA GGCCGTGGTC CCGGACAGCT ACTACGCGCC TGCGCACTGG
CCCGTGGAAG CGCACGGCAA GCGCTTTGCC GAGTCGGTGG CAGAGCAGTT GGATGCCATG
CGCAAGGCAG GCAAGCGCCC CGGGTTTTTC ATTGCCGAAT CGATCCCCAG CGTGGCGGGG
CAGGTGTTTT TGCCCGAACA CTACCTTGAG GAGGTGTACG CCATGGTGCG CGCCGAAGGT
GGTCTGTGCC TGGCCGATGA GGTTCAGGTC GGGTTTGGCC GGGTCGGCAG CCACTGGTGG
GCATTCGAGA CCCAGGGCGT GGTCCCGGAT GCCGTCAGCA TGGGCAAACC CATTGGTAAC
GGCCACCCGA TGTCGGCGGT AGTGACCACG CGCGAGGTTG CCGATGCTTT CAACAACGGC
ATGGAGTATT TCAATACCTT CGCCGGTAAC CCAGTGTCAT GCGCGGTAGG CCTGGCGGTG
CTCGATGCAA TCGAGCGCGA CCAGTTGAAA GAAAACGCCT TGAATGTCGG CCATTACCTG
CTCGAGGGTT TGCGCAAGCT TCAGCAGCAA TTCGACGTGA TTGGTGATGT GCGCGGGTTG
GGCCTGTTCC TCGGCATCGT GCTGGTCACT GACCGCAAGT CAAAGGCGCC AGCCACGGCC
CTGGCCAGAA AAGTGGCTGA TGGTGCCCGG GAGCGCGGCG TGTTGATCGG CACCGAAGGC
CCGCATGACA ACGTGCTGAA AATGCGCCCT TCGATGATTT TCAGCCGGAC CAATGCGGAC
TTCCTTCTCG AGGTGCTGAA AGACAGCTTC ATCGCCGCGC TGAAATAG
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| Protein sequence | MTDLSHPAPR FSASDAEGLA KDFFNVTGTA TPLDGERDRN YRLETGVDAG WILKIVNASE
PRVESEFQTA LLDHLAVHGA HLGVPHLRAS VTGDYLPSVA SSTGEQHAVR LVSWLAGTPL
AKARRSLALM RNFGQALGEL DRALQGFMHP GAVRDLDWDL RHAARSRSRL HCIKDPDRRA
VAERFITRFE QTVQPELASL RAQVIHNDAN DWNILVDAET PRNVTGFIDF GDAVHTVLIA
EVAIASAYAI LDMDDPIGAA AALVAGFHEK YPLQAQELDV LFNLIAMRLV ISVTFSASRQ
DQTDDNPYLA ISEAPAWRLL EQLDSMNPRL ATGILRKACG FDAIEGAGEV RRWIADNHKS
FADLVRPSAA ILDKVIAPFG DASHEMTIAS AQQRPADATR WWNECSAAHK APLGIGPWGE
VRAVYTDSAF ESRFIKGQHR TLHVGVDLLM PAGTPLYAPI AGTVRSVEVE PGPLGYGGLV
MLEHTPPGCP PFLTLWGHMA HEALSRLKAG DKLEAGDLVG YMGSDHENGG WIPHLHLQVV
TDTQLRACEV IGVGEPAYRE AWADLFPDAS ALAGIPPETY SQQGMTKAQI IARRKELLLP
NLSISYTDPI KFVRGDGVWL IDNFGRAYLD CFNNVCHLGH SHPDVVEALT RQAALLNTNT
RYLHDNIVEY AERLTGTLPK GLCVASFGCS GSEANSLMLR MARNYTGSDQ AIVLDWAYHG
TTQELIDLSP YKYKRKAGKG RAAHVYEAVV PDSYYAPAHW PVEAHGKRFA ESVAEQLDAM
RKAGKRPGFF IAESIPSVAG QVFLPEHYLE EVYAMVRAEG GLCLADEVQV GFGRVGSHWW
AFETQGVVPD AVSMGKPIGN GHPMSAVVTT REVADAFNNG MEYFNTFAGN PVSCAVGLAV
LDAIERDQLK ENALNVGHYL LEGLRKLQQQ FDVIGDVRGL GLFLGIVLVT DRKSKAPATA
LARKVADGAR ERGVLIGTEG PHDNVLKMRP SMIFSRTNAD FLLEVLKDSF IAALK
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