| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2385 |
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| Symbol | |
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| ID | 5195355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2719842 |
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| End bp | 2722205 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586842 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001267708 |
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| Protein GI | 148547606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.437807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACC CGCGCCTGTT GCTCTCCATC CTGCTGCTGA AAGCCACGCT GGCCCAGGCC
TCACCGTTCA GGATCGCCGA CATTCGCGTC AACGGCCTGC AGCGGGTTTC CGCCGGCAGT
GTGTTCGGTG CCTTGCCGCT GAACGTTGGC GACCAGGCCG ACGACCGCCG CCTGGTGGAC
TCGACGCGTT CCTTGTTCAA GACCGGGTTC TTCCAGGACA TCCAGTTGAG CCGCGATGGC
AATGTGCTGA TCATCAACGT GGTCGAGCGC CCGTCGGTAT CGAGCATCGA GATTGAAGGC
AACAAGGCGA TCAGCACCGA AGACCTGATG AAGGGCCTGA AACAATCGGG CCTGGCCGAA
GGCGAGATCT TCCAGCGTGC CACCCTCGAA GGTGTGCGTA ATGAGCTGCA GCGCCAGTAC
GTGGCCCAAG GGCGCTACTC GGCCGAGGTC GACGCCGAGG TGGTGCCGCA GCCGCGCAAC
CGTGTGGCGC TGAAGATCAA GATCAACGAA GGCACCGTCG CCGCCATCCA GCACATCAAC
ATCGTGGGCA ACAACGTATT CGATGATGAG ACCCTGGGGC AGCTGTTCGA GCTGAAGACC
ACCAACTGGC TGTCGTTCTT CAAGAACGAC GACAAGTACG CCCGTGAAAA ACTCTCCGGT
GACCTGGAGC GCCTGCGTTC CTACTACCTG GACCGCGGCT ACATCAACAT GGACATCGCC
TCCACCCAGG TGTCCATCAC GCCGGACAAG AAGCACGTCT ACATCACCGT CAACATCAAC
GAAGGCGAGA AATACACCGT TCGCGACGTG AAGCTGTCCG GTGACCTCAA GGTGCCGGAA
GACCAGGTCA AGTCGTTGTT GCTGGTGCAG CCGGGCCAGG TGTTCTCGCG CAAGGTGATG
ACCACCACGT CCGAGCTGAT CACCCGCCGC CTGGGTAACG AAGGCTACAC CTTCGCCAAC
GTCAACGGCG TGCCGCAACC AAACGACCAG GACCACACCG TCGACATCAT GTTCGTGGTC
GACCCGGGCA AGCGTGCCTA CGTCAACCGC ATCAACTACC GCGGCAACAC CAAGACCGAA
GACGAAGTGC TGCGTCGCGA AATGCGCCAG ATGGAAGGTG GCTGGGCGTC GACCTACCTG
ATCGACCAGT CCAAGACCCG TCTTGAGCGC CTGGGCTTCT TCAAGGAAGT CAACGTCGAG
ACCCCGCAGG TGCCTGGCAC CGACGACCAG GTCGACGTCA ACTACAGCGT CGAAGAGCAG
GCCTCCGGCT CGATCACCGC CAGCGTCGGT TTCGCCCAGA GCGCCGGCCT GATCCTGGGG
GGTTCGATCA GCCAGAACAA CTTCCTCGGT ACCGGTAACA AGGTATCCAT CGGCCTGACC
CGTTCGGAAT ACCAGACCAA GTACAACTTC GGCTTCGTCG ACCCCTACTT CACCGCCGAC
GGCGTGAGCC TGGGCTACAA CCTGTTCTAC AACAGCACCG ACTACAGCGA TTACTACGAC
GATGGGGTTT CGTATTATGC AATCAACAGC TACGGCGCCG GGGTCAGCTT CGGCTACCCG
ATCAACGAAA CCTCGCGCCT GACCTACGGC CTGACCCTGC AGCACGACGA CATTTCGCCC
GGCACCTACA GCGCTGACGA GATCTACGAT TTCATCTCCC GCGAAGGCAA AAGCTTCAAC
AACCTCAAGG CGTCGATCGG TTGGTCGGAA TCTACCCTCA ACAAAGGCGT GCTAGCCACC
CGGGGCCACT CGCAGAGCCT GACGCTGATG GCTACCACCC CTGGCAGCGA CCTGTCGTTC
TACAAGCTCG ACTACAACGG CCAGGCTTTC CTGCCGGTCA CCAGCAACAC CACGCTGCGC
CTGCACACCA ACCTGGGCTA CGGCAACGGC TATGGCTCCA CCGACGGCTT GCCGTTCTAT
GAAAGCTACA ACGCCGGTGG GCAGGGCTCG GTACGCGGGT TCAAGGACGG CACCCTCGGC
CCGCGCAGCA CACCGGCTAC CGGGGCCTAT TCCAGCGCTG GGCAGGCTTA CTATTCCGAC
CGCGACACCG ATGTGCTGGG GGGGAATATC CTGATTACCG GCGGTGCCGA GTACCTGTTC
CCGCTGCCCT TCGTGAAGGA CCAGAGCCAG CTGCGCAGCT CGGTGTTTGT CGATGCCGGC
AACGTATATG CCGACACCTG CTACCTGTCC ACCACCCAAG GCTGCGGCAG CGTCGACCTG
GCGCAGATGG CTGTGTCGCT GGGGGTTGGC GTGACCTGGT ACAGCCCGAT GGGGCCGCTG
AGTTTCAGCC TGGCGGCGCC ATTGAAAAAG CCGGATAACG CCGAAACCCA GGTGTTCCAG
TTCTCGTTGG GGCAGACCTT CTGA
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| Protein sequence | MNYPRLLLSI LLLKATLAQA SPFRIADIRV NGLQRVSAGS VFGALPLNVG DQADDRRLVD
STRSLFKTGF FQDIQLSRDG NVLIINVVER PSVSSIEIEG NKAISTEDLM KGLKQSGLAE
GEIFQRATLE GVRNELQRQY VAQGRYSAEV DAEVVPQPRN RVALKIKINE GTVAAIQHIN
IVGNNVFDDE TLGQLFELKT TNWLSFFKND DKYAREKLSG DLERLRSYYL DRGYINMDIA
STQVSITPDK KHVYITVNIN EGEKYTVRDV KLSGDLKVPE DQVKSLLLVQ PGQVFSRKVM
TTTSELITRR LGNEGYTFAN VNGVPQPNDQ DHTVDIMFVV DPGKRAYVNR INYRGNTKTE
DEVLRREMRQ MEGGWASTYL IDQSKTRLER LGFFKEVNVE TPQVPGTDDQ VDVNYSVEEQ
ASGSITASVG FAQSAGLILG GSISQNNFLG TGNKVSIGLT RSEYQTKYNF GFVDPYFTAD
GVSLGYNLFY NSTDYSDYYD DGVSYYAINS YGAGVSFGYP INETSRLTYG LTLQHDDISP
GTYSADEIYD FISREGKSFN NLKASIGWSE STLNKGVLAT RGHSQSLTLM ATTPGSDLSF
YKLDYNGQAF LPVTSNTTLR LHTNLGYGNG YGSTDGLPFY ESYNAGGQGS VRGFKDGTLG
PRSTPATGAY SSAGQAYYSD RDTDVLGGNI LITGGAEYLF PLPFVKDQSQ LRSSVFVDAG
NVYADTCYLS TTQGCGSVDL AQMAVSLGVG VTWYSPMGPL SFSLAAPLKK PDNAETQVFQ
FSLGQTF
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