| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2338 |
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| Symbol | |
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| ID | 5193809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2668616 |
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| End bp | 2669806 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586795 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001267661 |
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| Protein GI | 148547559 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACA GCCTCAAGGC CCTGGGTAGG CAGGGCGTGG TGCAGTTGCA GATCGACGCC
GAGGACGCCG ACCAGGCCCG CCGCCAGGCC GAAGACCAAG GCCTGCGTGT GCTCAGCCTG
CGCAGCAGCG GCGGCGCCCT GCGCAGCATG GCCTGGCGCC GTGAAGCGGC GTTCGACCTG
GTGCTGTTCA GCCAGGAACT GTCAACCTTG CTCAATGCCG GCCTGCCGCT GATTGACGCA
CTGGAAAGCC TGGCGGAGAA GAGCCCCGCA GCGACAGCGC GCAAGGTGCT CGCCGAGCTG
GTGCGCCAGC TGTACGAGGG CCGCTCGCTG TCCCAGGCGC TGGGCCAGCA ACCGCGGGTA
TTCCCGCCGC TGTATGTGGC GCTGGTGCAG TCCAGCGAAC GCACCGGTGC TCTGGGCGAC
GCCCTCACCC GCTACATCAG CTATCGCCAG CGCCTGGACC TGGTCCGGCA GAAGCTGGTG
GGTGCCTCGG TCTACCCATT ACTGCTGTTG CTGGTGGGAG GCGGTGTGGT GCTGTTCCTG
CTCGGCTATG TGGTGCCGCG GTTCAGCCAG GTGTTCGAGG GCATGGGCAC CGAGCTCCCC
TGGCTGTCAC GGGTGCTGAT GCAGGTCGGC CTGTTTCTGC ATGCCCAGCA AGCGCCACTG
GCGCTGGGCA CCGTCGGTGG GGTCGCGGCG CTTTGGCTGC TGCGCCGGCA CCCGCGTGTA
CGGTACTGGG CCTCCTGCCA ACTGCGGCGC CTGCCCGCGC TGCACCAACG CCTGATGATG
TACGAGCTGG CGCGTTTCTA TCGCTCGCTG GGCATCCTGC TGCAAGGCGG CATCCCCATC
CTCACCGCCA TGGGCATGGC CCGCGGCCTG CTCGGCAACG CAGCAGCGCA GGGCCTGGAG
CAGGCCAGCC AGCGGGTGGG CGAAGGGCTG CCGCTCTCCG ATGCACTCGC GGCCGGGCAC
CTGGTAACGC CGGTATCCCT GCGCCTGCTG CGCGCTGGCG AGCAGTCTGG CAACCTGGGC
GAGATGCTGG AGCGCTGCGC CGACTTCCAT GATCAGGAAA TCGGCCGCTG GGTGGAATGG
TTCGTCAAAC TGTTCGAGCC GCTGTTGATG ACCTTCATCG GCCTGCTGAT CGGCCTGATC
GTGATCCTCA TGTACATGCC AATCTTCGAG CTGGCCTCAA GTATTCACTG A
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| Protein sequence | MRYSLKALGR QGVVQLQIDA EDADQARRQA EDQGLRVLSL RSSGGALRSM AWRREAAFDL
VLFSQELSTL LNAGLPLIDA LESLAEKSPA ATARKVLAEL VRQLYEGRSL SQALGQQPRV
FPPLYVALVQ SSERTGALGD ALTRYISYRQ RLDLVRQKLV GASVYPLLLL LVGGGVVLFL
LGYVVPRFSQ VFEGMGTELP WLSRVLMQVG LFLHAQQAPL ALGTVGGVAA LWLLRRHPRV
RYWASCQLRR LPALHQRLMM YELARFYRSL GILLQGGIPI LTAMGMARGL LGNAAAQGLE
QASQRVGEGL PLSDALAAGH LVTPVSLRLL RAGEQSGNLG EMLERCADFH DQEIGRWVEW
FVKLFEPLLM TFIGLLIGLI VILMYMPIFE LASSIH
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