| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2273 |
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| Symbol | |
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| ID | 5194068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2585647 |
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| End bp | 2586972 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586730 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001267596 |
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| Protein GI | 148547494 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC CTGCCGCTCA ACGCCGTTTG CTTATCGTCG ACCCCTGCGA CGATTGCCAC
CGCTTGTTAC CTGGCCTGCG CAACGCAGGC TGGGATGTGG ACAGCTGTAT GCTCGGGGCT
GCGCTGGACC ACACGTGCGA TGTCGGGCTA TTGCGCTTGC AGGCTTCGCA CCTGAGGCAC
CCGGACGCGG TCAAGGACAT GATCAAGCGC AGCAACACCG AATGGATTGC CGTGCTCAGC
GCCGATCAGT TGCGCATGCC GGCGTTCGGT GATTTTGTGT GTGAGTGGTT TTTCGACTTC
CATACCCTGC CGTTCGACGT CTCCCGCGTG CAGGTAACCC TGGGCCGGGC CTTCGGCATG
GCGCGCTTGC GCGGCAAGGG GGCCATCAAG GTCGATGAGG CAACCCATGA GTTGCTCGGC
GAAAGCCGAC CTATCCGCGA GTTGCGCAAG TTGCTGGGTA AACTGGCACC CACCGAATCG
CCTGTGCTGA TCCGCGGGGA GAGCGGCACC GGCAAAGAGC TGGTGGCGCG CACCTTGCAC
CGTCAGTCGC AACGCAGCGA GCAGCCGTTC ATCGCGATCA ACTGCGGGGC GATCCCCGAG
CACTTGATCC AGTCCGAACT GTTCGGCCAT GAGAAGGGCG CCTTTACCGG TGCCCACCAG
CGCAAGACCG GGCGTATCGA AGCGGCCGAT GGCGGCACAT TGTTTCTTGA TGAAATCGGC
GACCTGCCGT TGGAATTGCA GGCCAACTTG CTGCGTTTTT TGCAGGAGAA GCACATCGAG
CGCGTGGGTG GCAGCCAGCC CATACCGGTG GATGTACGGG TGCTGGCGGC CACCCATGTG
GACCTTGAGC GGGCAATCGA GCAAGGGCGT TTCCGCGAAG ACCTGTATTA CCGCCTGAAC
GTATTGCAGG TGGTGACCGC GCCGTTGCGC GACCGGCATG GTGACCTGTC GATGCTGGCC
AACCATTTTG CCCATTTCTA CAGTGTGGAG ACCGGGCGTC GGCCACGGTC GTTCAGCGAC
CATGCCCTGG CGGCGATGGG GCGGCATGAC TGGCCGGGCA ATGTGCGCGA ACTGGCCAAC
CGCGTGCGCC GCGGGTTGGT GCTGGCCGAA GGGCGGCAGA TCGAGGCGCA GGACTTGGGG
TTGCAACTGC TCGACCCGGA GCAACAGCCG CTGGGCACGC TGGAAGAGTA CAAGCAGCGC
GCCGAGCGCC AGGCGCTGTG CGATGTGCTC AACCGGCACA GCGACAACCT GAGCGTGGCG
GCCAAGGTGC TGGGCATTTC ACGGCCGACG TTCTATCGGT TGTTGCACAA GCACCAGATA
CGTTGA
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| Protein sequence | MQQPAAQRRL LIVDPCDDCH RLLPGLRNAG WDVDSCMLGA ALDHTCDVGL LRLQASHLRH
PDAVKDMIKR SNTEWIAVLS ADQLRMPAFG DFVCEWFFDF HTLPFDVSRV QVTLGRAFGM
ARLRGKGAIK VDEATHELLG ESRPIRELRK LLGKLAPTES PVLIRGESGT GKELVARTLH
RQSQRSEQPF IAINCGAIPE HLIQSELFGH EKGAFTGAHQ RKTGRIEAAD GGTLFLDEIG
DLPLELQANL LRFLQEKHIE RVGGSQPIPV DVRVLAATHV DLERAIEQGR FREDLYYRLN
VLQVVTAPLR DRHGDLSMLA NHFAHFYSVE TGRRPRSFSD HALAAMGRHD WPGNVRELAN
RVRRGLVLAE GRQIEAQDLG LQLLDPEQQP LGTLEEYKQR AERQALCDVL NRHSDNLSVA
AKVLGISRPT FYRLLHKHQI R
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