Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2207 |
Symbol | |
ID | 5191990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2510252 |
End bp | 2511157 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586664 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001267530 |
Protein GI | 148547428 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGC TGCTGGCGAT GAAAATGTTC GTGGCCACTG TCGATGCCCA AGGCTTTTCT GCTGCCGCGC GCAGGCTAGG GCTGGCGACA TCGTCGGTGA CACGTCTGGT CGATGCCCTG GAAGCGTCGC TGGGTGCCAC CTTGCTCAAC CGCTCGACAC GCCAGGTCAG CCTGACCGAG GCTGGCGCCC GTTACTACCA GCGCGCACGG GGCATTTTTG AAGCACTGGA CGAGGCTGAT GCCAGCATCG CCGATCGCGG CGAGGAGCCT GTCGGTGTGC TGCGCCTGTG CCTGCCAGTG GAGTTCGGCA GGCGGGTCAT TGCCCCGCAC CTGGGGCCAT TCCTGGCGCA GCACCCGGCG CTGGAACTGG ACATCGACCT CAGTGACCGG CTGGACGACT TGCTTGACGG GCGCTATGAC CTGTCGATTC GCCTGGGCGA CCCCTCGCCC AATGACGAGT TGGTGTGCCG CCAGCTCGGC CGTTTTCAGC GTTGGCTGGT GGCCAGCCCG GCTTACCTGG CCGGGCGTGA GCCACTGCAG CATCCCCGGG AGTTGCTTGA CCATGCCTGC CTGCGTTTTC GCTATGGGCA GAAAGCGCGC CCCTGGCGCC TGACCTGTGG CCAGGACAGC CTGGAACTGG ACGTAAGTGG GCCACTGCGC AGCGCCAATG CCGACATGTT GCGTGAAACG GCACTGGCAG GCAGTGGTAT CGCACTGCTG GCCGACTGGC TGGTACGCGA GGATGTGTTG GCAGGGCGCT TGCAGCGGGT CTTCCCCGAC TGGCAGGCCA GCCCTGGCAT GGCCAATAAC AGCATTAACG CCTTGTATAT GCCCAACCAC CGGGGCTCAC GGCGGGTAAA CGCCTTCATC GACTTTTGCG AAAATTTGCT CATACACGGT AACTAG
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Protein sequence | MDKLLAMKMF VATVDAQGFS AAARRLGLAT SSVTRLVDAL EASLGATLLN RSTRQVSLTE AGARYYQRAR GIFEALDEAD ASIADRGEEP VGVLRLCLPV EFGRRVIAPH LGPFLAQHPA LELDIDLSDR LDDLLDGRYD LSIRLGDPSP NDELVCRQLG RFQRWLVASP AYLAGREPLQ HPRELLDHAC LRFRYGQKAR PWRLTCGQDS LELDVSGPLR SANADMLRET ALAGSGIALL ADWLVREDVL AGRLQRVFPD WQASPGMANN SINALYMPNH RGSRRVNAFI DFCENLLIHG N
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