Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2202 |
Symbol | |
ID | 5194564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2503863 |
End bp | 2504540 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586659 |
Product | hypothetical protein |
Protein accession | YP_001267525 |
Protein GI | 148547423 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.808249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCT CCATCATTGG TCGTTGCCAG GAAACCGGCC AGGTCGGTAT TGCCATCAGC TCGTCGAGCA TCGCCGTGGG TGCACGTTGC CCTTGGGTGC GTGCCGGTGT GGGCGCAGTC TCGACCCAGA ACATCACCCT GCCGGCGCTG GGCCCTCAGA TTCTCGATGC CCTGGAGCAT GGCCAGTTGC CGCCCGCCGC AGCGCTGGAC AGGGTGCTCA GTGCCAATGG CTGGAGTGAG TACCGCCAGG TCACGGTGAT CGACAGCCAC GGCCAGGTGG CCCTGTTCAC CGGGCGGGAA GCCTTGGGAA CACACCATGC AATGGCCGGC GAACAATGCG CGGCGGCCGG CAACCTGCTG TCCTCGACCC AGGTGATCGA AGCCATGGTG CTGGCCTTCG AGCAGGCCGG CGGCCACCTG GCCGAGCGCC TGCTGGCAGC CATGCACGCG GCGATGGCAG CGGGTGGCGA AGCCGGGCCC GTGCACTCAG CGGCGCTGAA GATTGCTGGC GAGCTGACCT GGCCGCTGGT GGACCTGCGC GTCGATTGGG CCGACAGCGA CCCGATCGGC GTGCTCGATG GCTTGTGGCA AGCCTATCGC CCGCAGATGC AGGATTACGT CACCCGCGCC CTCAACCCGA CCGCCGCGCC AAGCTATGGG GTGCCGGGCG ATGAGTGA
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Protein sequence | MTFSIIGRCQ ETGQVGIAIS SSSIAVGARC PWVRAGVGAV STQNITLPAL GPQILDALEH GQLPPAAALD RVLSANGWSE YRQVTVIDSH GQVALFTGRE ALGTHHAMAG EQCAAAGNLL SSTQVIEAMV LAFEQAGGHL AERLLAAMHA AMAAGGEAGP VHSAALKIAG ELTWPLVDLR VDWADSDPIG VLDGLWQAYR PQMQDYVTRA LNPTAAPSYG VPGDE
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