Gene Pput_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2202 
Symbol 
ID5194564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2503863 
End bp2504540 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID640586659 
Producthypothetical protein 
Protein accessionYP_001267525 
Protein GI148547423 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.808249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCT CCATCATTGG TCGTTGCCAG GAAACCGGCC AGGTCGGTAT TGCCATCAGC 
TCGTCGAGCA TCGCCGTGGG TGCACGTTGC CCTTGGGTGC GTGCCGGTGT GGGCGCAGTC
TCGACCCAGA ACATCACCCT GCCGGCGCTG GGCCCTCAGA TTCTCGATGC CCTGGAGCAT
GGCCAGTTGC CGCCCGCCGC AGCGCTGGAC AGGGTGCTCA GTGCCAATGG CTGGAGTGAG
TACCGCCAGG TCACGGTGAT CGACAGCCAC GGCCAGGTGG CCCTGTTCAC CGGGCGGGAA
GCCTTGGGAA CACACCATGC AATGGCCGGC GAACAATGCG CGGCGGCCGG CAACCTGCTG
TCCTCGACCC AGGTGATCGA AGCCATGGTG CTGGCCTTCG AGCAGGCCGG CGGCCACCTG
GCCGAGCGCC TGCTGGCAGC CATGCACGCG GCGATGGCAG CGGGTGGCGA AGCCGGGCCC
GTGCACTCAG CGGCGCTGAA GATTGCTGGC GAGCTGACCT GGCCGCTGGT GGACCTGCGC
GTCGATTGGG CCGACAGCGA CCCGATCGGC GTGCTCGATG GCTTGTGGCA AGCCTATCGC
CCGCAGATGC AGGATTACGT CACCCGCGCC CTCAACCCGA CCGCCGCGCC AAGCTATGGG
GTGCCGGGCG ATGAGTGA
 
Protein sequence
MTFSIIGRCQ ETGQVGIAIS SSSIAVGARC PWVRAGVGAV STQNITLPAL GPQILDALEH 
GQLPPAAALD RVLSANGWSE YRQVTVIDSH GQVALFTGRE ALGTHHAMAG EQCAAAGNLL
SSTQVIEAMV LAFEQAGGHL AERLLAAMHA AMAAGGEAGP VHSAALKIAG ELTWPLVDLR
VDWADSDPIG VLDGLWQAYR PQMQDYVTRA LNPTAAPSYG VPGDE