| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2178 |
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| Symbol | |
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| ID | 5190657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2471269 |
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| End bp | 2471988 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586635 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001267501 |
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| Protein GI | 148547399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.142027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC AATTGTCCTT GCTGTCTTTC GCCAGCGGAG GCTGGGGCCA GGCGTTGCTG
GCCGGCGCGC TGGTTACCGT TTCCCTGGCC TTGGCCTGCC TGCCCATCGG CCTGCCACTG
GGCCTGGTGG TCGCGCTGGC GGCGCGCTCA CGCAAACGCC TGCCACGGGC CTGGGCCACC
ACTTTTTCCA CCGTCTTCCG CGGCCTGCCC GAGCTGCTGA CCTTGCTGAT CATCTATTAC
GGCTGCCAGA TCGCCGCGCA GAAGATCCTC GCCGCCATGG GCTACCAAGG TGAGTTCCTC
ATCAACACCT TCCTCGCCGC GATGATCGCC TTCAGCCTGG TGTTCGCCGC GTTTTCCAGC
GAGATCTGGC TGGCTGCCTT CAAGACCCTG CCCAAAGGCC AGTTGGAAGC CTGCTCGGCG
CTTGGGCTTA GCAAGCGCAC CGGCTTCTTC AAGGTGCTGC TGCCACAACT GACCCGCATC
GCCCTGCCCG GCTTGTCCAA CAACTGGCTT TCGCTGCTCA AGGACACCTC GCTGGTGTCG
ACCATCTCGC TGGTAGACCT GATGCGCCAG ACCAACCTGG CGGTCAGCGT AACCAAGGAG
CCGATGTTCT TCTACGGCGT CGCCTGCCTG GGCTACCTGC TGTTCGCGGC ACTGTCCGGG
CGCGTGTTCG CCTACATCGA ACGGCGCAGC AACCGCCACC TGCAAGGAGC ACGCGCATGA
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| Protein sequence | MLDQLSLLSF ASGGWGQALL AGALVTVSLA LACLPIGLPL GLVVALAARS RKRLPRAWAT
TFSTVFRGLP ELLTLLIIYY GCQIAAQKIL AAMGYQGEFL INTFLAAMIA FSLVFAAFSS
EIWLAAFKTL PKGQLEACSA LGLSKRTGFF KVLLPQLTRI ALPGLSNNWL SLLKDTSLVS
TISLVDLMRQ TNLAVSVTKE PMFFYGVACL GYLLFAALSG RVFAYIERRS NRHLQGARA
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