| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2143 |
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| Symbol | |
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| ID | 5190691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2433904 |
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| End bp | 2435061 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586600 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001267466 |
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| Protein GI | 148547364 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAC AAGACAGGCA ATTGAAGGTG GGCTTGCTGT TCGCCGAAAC CGGCGTTACC
GCAGCCATTG AACGCTCGCA GCGCTGTGGC GCGCTGCTGG CGGTCGAACA GGTTAACCGC
GAGGGGGGCG TACTTGGCGA ACCGGTTCTG ACCCTGGTCG GCGACCCCGG GGGCGACCCG
GACCGTTATC GCAATCTGTG TGACGACTAT GTGCGCAACC ACGGTGTGCG CCTGATGCTC
GGCTGCTACA TGTCGCACAC CCGCAAAGCC GTGATGCCCG TCATCGAGCG CGCCGATGGC
TTGCTGTTCT ATCCCACGCC CTATGAGGGC TTCGAGTACT CGCCCAATAT CATCTACGGC
GGGCCGGCAC CTAACCAGAA TAGCGCGCCA CTGGCGGCAT ACCTGACACG TCATTACGGT
GCCAGGGTCG CCTTCGTCGG TTCCGACTAC ATCTACCCGC GGGAAAGCAA CCATGTCATG
CGCCACCTGT ACAAGCAGCA TGGTGGCGAA GTGGTGGAAG AAGCCTACAT GCCCCTGTAC
CCCTCGGCCG ATGACCTGGC CCTGGTGGTC GAGCGGGTGG TGCGTTCTGC CCCTGACGTG
GTGTTCTCGA CCGTGGTCGG TACGGGGACG GCAAGCTTCT ACCAAGCAAT GGCGCAGCGC
TATGGCAATG GCCCTCGGCC GCCGATCGCC AGCTTGACTA CCAGCGAGGC AGAAATTGCC
GAAATGGGGG CCGAGGCGGC CCGTGGCAAC ATCGTCGTGG CACCCTACTT CACCAGCGTC
GAGTCACCGC AAAGCAACGC ATTCGTCAGT CAGTGCCGTG CGTTCTTTCC GGCCGATGTG
CGCATCACTG CCTGGGCCGA GGCGGCGTAC TGCCAGATGC GCATGCTGTG CCAGGCGGTA
AATGCCACCG GCAGCCTGGA GGTGGAGGTA ATCCGCAATC ACCTGTACCA CGCGAGCATG
GATAGCCCCC AGGGCAGGGT GCAGGTGGAG CAGCAGAACA ACCACTCGCA CCTGTTTTCA
CGTATCGGCG AGATCGATGC GCGCGGGCAG ATCTGCATCA AATGGCAATC GTCTACGACC
ATCCGCCCTG ACCCCTATGT GGTGGTTCAC AACCTGGACG ACTGGACCTT GAGCATGATG
GGAGGCGGCC CCTCATGA
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| Protein sequence | MSRQDRQLKV GLLFAETGVT AAIERSQRCG ALLAVEQVNR EGGVLGEPVL TLVGDPGGDP
DRYRNLCDDY VRNHGVRLML GCYMSHTRKA VMPVIERADG LLFYPTPYEG FEYSPNIIYG
GPAPNQNSAP LAAYLTRHYG ARVAFVGSDY IYPRESNHVM RHLYKQHGGE VVEEAYMPLY
PSADDLALVV ERVVRSAPDV VFSTVVGTGT ASFYQAMAQR YGNGPRPPIA SLTTSEAEIA
EMGAEAARGN IVVAPYFTSV ESPQSNAFVS QCRAFFPADV RITAWAEAAY CQMRMLCQAV
NATGSLEVEV IRNHLYHASM DSPQGRVQVE QQNNHSHLFS RIGEIDARGQ ICIKWQSSTT
IRPDPYVVVH NLDDWTLSMM GGGPS
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