| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2051 |
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| Symbol | |
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| ID | 5195044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2321772 |
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| End bp | 2322539 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586509 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001267375 |
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| Protein GI | 148547273 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.641389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAC GTCTTAACGG CAAGGTGGCG CTGATCACTG GCGGTGCGGG TGGCTGCGGG
CTAGCCGCAT CGGAGCTGTT CGCGGCAGAA GGGGCAAGGG TAGGCATTGT CGACCTGCCC
GGCAGCAAGG GCGCCGAAGT TGCAAGGCGA TTGCGTGATG CAGGTTACCA GGCCATCTTC
GCCGCCGCCG ATGTCTCGGA CGCACAACAA GTGAAGGCCG CGGTGGCGGC CGTAGAAGAG
GCCTTCGGCC ACATCACCGT GCTGATGAAC CACGCGGGCA TCCTGTCGGC CATGCCCTTC
CTGGAAACCA GTGAAGAAGA ATGGGACCGG ATCATGGCCG TGAACGTGAA GAGCATGTTC
CTGGTCACCG GCGCGGTGTT GCCGGGCATG CTCGCGGCCG GCGGCGGCAG TATCGTCTGC
ACTTCATCCA TCTCGGCAGT GGTGGGCACG CCGATGGAGG TGCTGTATTG CACCAGCAAG
GGTGCCACCC ATATGTTCGC CCGGGCTATC GCTGTGGAGT TTCGCGACCG AGGCATTCGC
GCCAATGCCA TCTGCCCGGG CTTCATCGCC ACCGCCCACG GCCTGCGCGA GATCGATATG
TTGCGCAAAC ATGGCGTGGA CGTCAGCGAA CAGGCCATCG CTGCCGCCCA GGGGCGCTTG
TGCCAACCCT CGGAAGTCGC CAGCGCAGCC TTGTTCCTGG CCAGTGACGA CGCCAGTTTC
GTAAACGGTG CGCACCTGTT TGCCGACAAT GGCTACACCG CCCTCTGA
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| Protein sequence | MAGRLNGKVA LITGGAGGCG LAASELFAAE GARVGIVDLP GSKGAEVARR LRDAGYQAIF
AAADVSDAQQ VKAAVAAVEE AFGHITVLMN HAGILSAMPF LETSEEEWDR IMAVNVKSMF
LVTGAVLPGM LAAGGGSIVC TSSISAVVGT PMEVLYCTSK GATHMFARAI AVEFRDRGIR
ANAICPGFIA TAHGLREIDM LRKHGVDVSE QAIAAAQGRL CQPSEVASAA LFLASDDASF
VNGAHLFADN GYTAL
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