Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2047 |
Symbol | |
ID | 5193436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2317221 |
End bp | 2318126 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586505 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001267371 |
Protein GI | 148547269 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.909025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGG CGCAAAGGGC TGTGCGCGGG CGTGCCTGGC AGGCTAGACT GCCGGGCATG ACCCAAGCCT CCCCCGATAC CCCGCTTACC CTCACAATGG GCGCGCTGCA GCAGTGGCAC GTGGCATTGC AGCGCGCCCT GGCCCATGGC GAAACCCCCG AGGCGCTGGA GTATGTGGCC GCTGCCATCG GCCAGTTGGT GCAGGTGGAG TCGATGATGA TCAGCCTTGA GTGCCAGGGG CGGGCACCGC AGTTGCTGTA CCAGCAAGGC ATTCCTGAAC TGCACCGGGC TGCCGTGCTG GAGCGCTATT TCAGCGCCGG CTACCTGCTG GACCCTTTCT GCCTTGCCGT GCAAAGCGGC CTGGCCGAAG GCTTCTACCA CCTGCAGGAA ATCGCCCCCG ACAACTTCTT CGACAGCGAC TACTACAAGG CTTATTACCT GGGTACAGGT TGCAGTGAAG ACAGCTACTA CATCGTCGAC CTCAGCGCAG GCCGCAAGCT GTCGCTGAGC CTGTTCCAGG GCTGCAGCGG CACGCGCCTG AATGCCGGGC AGGTCGACCT GTTGCGTGCG CTGGAGCCGA TGGTGCGCGA ACTGCTGGGG CGCTATGCCC GGCACAACCT GGAACCGGGC GCTGCATCAA CCGAGCGCGG CAGCCTGCAG GCAGCGTTCG ACAGCTTTGG CTGCCAGGTG CTGACCGACC GCGAGCGGGA AGTGGCGCAC ATGATCCTGC GCGGGCACTC GGTGAAATCT ACTGCGCAGG AGCTGGGTAT CTCGCCGGAG ACCGTGCGCA TGCACCGCAA GAACCTGTAC ATGAAGCTCG GGATCAACTC GCAATCGGAG TTGTTTGCAC GGTTTATCGA CTGGTTACGC GGTGATCAGC TGGAAATCCA TAGCGTAACG CGGTGA
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Protein sequence | MNLAQRAVRG RAWQARLPGM TQASPDTPLT LTMGALQQWH VALQRALAHG ETPEALEYVA AAIGQLVQVE SMMISLECQG RAPQLLYQQG IPELHRAAVL ERYFSAGYLL DPFCLAVQSG LAEGFYHLQE IAPDNFFDSD YYKAYYLGTG CSEDSYYIVD LSAGRKLSLS LFQGCSGTRL NAGQVDLLRA LEPMVRELLG RYARHNLEPG AASTERGSLQ AAFDSFGCQV LTDREREVAH MILRGHSVKS TAQELGISPE TVRMHRKNLY MKLGINSQSE LFARFIDWLR GDQLEIHSVT R
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