Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2041 |
Symbol | alr |
ID | 5191531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2309543 |
End bp | 2310772 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586499 |
Product | alanine racemase |
Protein accession | YP_001267365 |
Protein GI | 148547263 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.29605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTTC GCCGTACACT TCTGGCCGCA TCCCTGGCCC TGCTGATCAC CGGCCAAGCC CCACTGTATG CCGCCCCCCC GTTGTCGATG GACAACGGTA CCAACGCCCT GACCGTGCAA AACAGCAATG CCTGGGTCGA AGTCAGCGCC AGCGCCCTGC AGCACAACAT CCGCACGCTG CAGGCCGAGC TGGCCGGCAA GTCCAAGCTG TGCGCCGTGC TCAAGGCCGA TGCCTATGGC CACGGTATCG GCCTGGTAAT GCCATCGATC ATCGCCCAGG GCGTGCCCTG CGTGGCGGTG GCCAGCAACG AGGAGGCCCG CGTGGTCCGC GCCAGTGGCT TCACCGGGCA ACTGGTGCGG GTACGCCTGG CCAGCCTAAG CGAGCTGGAA GATGGCTTGC AGTACGACAT GGAAGAGCTG GTGGGCAGCG CGGAATTTGC CCGCCAGGCC GATGCCATCG CCGCGCGCCA TGGCAAGACC TTGCGCATTC ACATGGCGCT CAACTCCAGC GGCATGAGCC GCAACGGGGT GGAGATGGCC ACCTGGTCCG GCCGTGGCGA AGCGCTGCAG ATCACCGACC AGAAGCACCT CAAGCTGGTC GCGCTGATGA CCCACTTCGC CGTGGAAGAC AAGGACGATG TCCGCAAGGG CCTGGCGGCC TTCAACGAGC AGACCGACTG GTTGATCAAG CACGCGAAGC TCGACCGCAG CAAGCTCACC CTGCACGCCG CCAACTCGTT CGCTACGCTG GAGGTGCCGG AAGCGCGCCT GGACATGGTA CGAACGGGGG GCGCGCTGTT CGGCGACACC GTGCCGGCGC GCACCGAGTA CAAGCGTGCG ATGCAGTTCA AATCGCACGT GGCTGCGGTG CACAGCTATC CGGCTGGCAA CACCGTGGGC TATGACCGCA CCTTCACCCT GGCCCGTGAT TCGCGCCTGG CCAACATTAC GGTCGGGTAC TCCGACGGCT ACCGCCGGGT ATTCACCAAC AAGGGCCATG TGCTGATCAA CGGCCACCGT GTGCCGGTGG TGGGCAAGGT GTCGATGAAC ACGCTGATGG TCGATGTCAC CGACTTCCCG GACGTGAAGG GGGGCAACGA AGTGGTGCTG TTCGGCAAGC AGGCCGGGGG CGAAATCACC CAGGCCGAGA TGGAAGAAAT CAACGGCGCG TTGCTCGCCG ATCTGTACAC CGTATGGGGC AGTTCCAACC CGAAGATCCT CGTCGACTGA
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Protein sequence | MPFRRTLLAA SLALLITGQA PLYAAPPLSM DNGTNALTVQ NSNAWVEVSA SALQHNIRTL QAELAGKSKL CAVLKADAYG HGIGLVMPSI IAQGVPCVAV ASNEEARVVR ASGFTGQLVR VRLASLSELE DGLQYDMEEL VGSAEFARQA DAIAARHGKT LRIHMALNSS GMSRNGVEMA TWSGRGEALQ ITDQKHLKLV ALMTHFAVED KDDVRKGLAA FNEQTDWLIK HAKLDRSKLT LHAANSFATL EVPEARLDMV RTGGALFGDT VPARTEYKRA MQFKSHVAAV HSYPAGNTVG YDRTFTLARD SRLANITVGY SDGYRRVFTN KGHVLINGHR VPVVGKVSMN TLMVDVTDFP DVKGGNEVVL FGKQAGGEIT QAEMEEINGA LLADLYTVWG SSNPKILVD
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