| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2040 |
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| Symbol | |
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| ID | 5193188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2307901 |
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| End bp | 2309508 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586498 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267364 |
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| Protein GI | 148547262 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.463751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC TTACCCTGAC GGCCGGCCAG GCGCTGGTGC GGTTGTTGGC CAACTACGGT
GTGGAGACCG TGTTCGGCAT CCCTGGGGTG CACACCCTGG AGCTTTACCG CGGCCTGCCG
GGCAGTGGCA TTCGCCATGT ACTGACCCGC CACGAGCAGG GCGCCGGCTT CATGGCCGAC
GGCTATGCGC GGGTCAGTGG CAAGCCGGGG GTGTGCTTCG TCATTACCGG CCCAGGCGTG
ACCAACGTCG CCACCCCCAT CGGCCAAGCC TATGCCGACT CGGTGCCGAT GCTGGTGATT
TCCAGCGTCA ACCACACCGC CAGCCTGGGC AAGGGCTGGG GCTGCCTGCA TGAAACCCAG
GACCAGCGCG CCATGACTGC GCCGATCACC GCGTTCTCGG CCGTGGCGTT GCGTGGCGAT
GACCTGCCCG AGCTGATCGC CCGCGCCTGG GCCGTGTTCG ACAGCGAACG GCCGCGCCCG
GTGCACATTT CGGTGCCGCT GGACGTGCTG GCCGCACCCG TCAGCCGTGA CTGGAGCGAT
GAGGTGGTGC GCCGCCCCGA GCGTGGCCAG CCGTGCCGCG AAAGCCTCGA CCAGGCTGCC
CTGAAGCTGG CAGCGGCCGA GCGGCCGATG ATCATCGCGG GTGGTGGTGC GCTGCATGCG
GCCGAACAAC TTGCGCAGTT GAGCGCCCGG CTGGCGGCAC CGGTATTCAC CAGCGTGGCC
GGCAAGGGCC TGCTGCCGCC GCAGGCGCCC CTGAATGCCG GTTCCAGCCT GTGCGTGGAA
CCCGGCTGGC AGCTGATCAG CCAGGCTGAT GTGGTGCTTG CCGTGGGCAC CGAAATGGCC
GACACCGACT TCTGGCGCGA GCGCCTGCCG ATCACTGGCG AGCTGCTGCG CGTGGACATC
GACCCGCGCA AGTTCAACGA CTTCTACCCC TGTGCCATTG CCTTGCAAGG TGATGCCCGG
CAAACCCTGG CCGGCTTGCT CGAACACCTG CCAGCACTCG ACCGAGACCC TGCTCAGGCC
AGCGAAGCGG TGAGCGACCT GCGCCAGGCC ATTCGTCATG GGCATGCACC GTTGCAGGCC
ATCCATCAGG CGATTCTTGA CCGCATTGCC GCCGTGCTGC CCGACGATGC GTTCATCAGC
AGCGACATGA CCCAACTGGC CTACACCGGC AACTACGCCT TCGCCAGCCG GGCGCCGCGC
AGCTGGCTGC ATCCTACCGG CTACGGCACA CTCGGCTACG GCCTGCCGGC CGGTATTGGC
GGCATGCTTG CCACCGACCA TCGCCCAGGC CTGGTGCTGG TGGGCGACGG CGGTTTCCTT
TATACCGCCC AGGAGCTGGC CACGGCTGTA GAGGAACTGG ACCGGCCGTT GGTGGTGCTG
CTGTGGAACA ACGACGCCCT CGGGCAGATC CGCGATGACA TGCTCGGCCT GAACATCGAG
CCGGTCGGCG TGCTGCCGCG TAATCCGGAC TTCATCGGCC TGGCCCGTGC CTTTGGTTGC
GCGGTGCGCC AGCCGCGTGA TCTGGACGCG CTGCAGGCCG ACCTGGCCAG CGGTTTCGCC
ACACCCGGCG TGACCTTCAT CGAACTCAAA CACACCTGCG TCTGTTAA
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| Protein sequence | MNDLTLTAGQ ALVRLLANYG VETVFGIPGV HTLELYRGLP GSGIRHVLTR HEQGAGFMAD
GYARVSGKPG VCFVITGPGV TNVATPIGQA YADSVPMLVI SSVNHTASLG KGWGCLHETQ
DQRAMTAPIT AFSAVALRGD DLPELIARAW AVFDSERPRP VHISVPLDVL AAPVSRDWSD
EVVRRPERGQ PCRESLDQAA LKLAAAERPM IIAGGGALHA AEQLAQLSAR LAAPVFTSVA
GKGLLPPQAP LNAGSSLCVE PGWQLISQAD VVLAVGTEMA DTDFWRERLP ITGELLRVDI
DPRKFNDFYP CAIALQGDAR QTLAGLLEHL PALDRDPAQA SEAVSDLRQA IRHGHAPLQA
IHQAILDRIA AVLPDDAFIS SDMTQLAYTG NYAFASRAPR SWLHPTGYGT LGYGLPAGIG
GMLATDHRPG LVLVGDGGFL YTAQELATAV EELDRPLVVL LWNNDALGQI RDDMLGLNIE
PVGVLPRNPD FIGLARAFGC AVRQPRDLDA LQADLASGFA TPGVTFIELK HTCVC
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