Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1911 |
Symbol | |
ID | 5194807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2186421 |
End bp | 2186738 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640586375 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_001267243 |
Protein GI | 148547141 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.272988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCCG TAGCTGATGC CGTCAAAAAG ATGCAAGAGA AATTCAACCC ATCCGCTGCC GCCGGCCTGG ACCTGGTGTT CGGCTTCAAC ATCACCGACG AAGACAAGCA CTACGCGCTG ATCGTCAAGG ACGGCACCTG CGACCTGCAG GAAGGCGAGA ACCCGGATGC CAACTGCACC CTGGTGATGG ACGCCGAAAC CCTGAAGGGT ATCGTCAGCG GCGAAACCGA CGGCATGCAG GCCTTCATGG GCGGCAAGCT GCGGGTTGAG GGCGACATGA TGCTGTCGAT GAAACTCAGC GAGCTGTTCC CGTCCTGA
|
Protein sequence | MTSVADAVKK MQEKFNPSAA AGLDLVFGFN ITDEDKHYAL IVKDGTCDLQ EGENPDANCT LVMDAETLKG IVSGETDGMQ AFMGGKLRVE GDMMLSMKLS ELFPS
|
| |