Gene Pput_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1911 
Symbol 
ID5194807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2186421 
End bp2186738 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content59% 
IMG OID640586375 
Productsterol-binding domain-containing protein 
Protein accessionYP_001267243 
Protein GI148547141 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.272988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG TAGCTGATGC CGTCAAAAAG ATGCAAGAGA AATTCAACCC ATCCGCTGCC 
GCCGGCCTGG ACCTGGTGTT CGGCTTCAAC ATCACCGACG AAGACAAGCA CTACGCGCTG
ATCGTCAAGG ACGGCACCTG CGACCTGCAG GAAGGCGAGA ACCCGGATGC CAACTGCACC
CTGGTGATGG ACGCCGAAAC CCTGAAGGGT ATCGTCAGCG GCGAAACCGA CGGCATGCAG
GCCTTCATGG GCGGCAAGCT GCGGGTTGAG GGCGACATGA TGCTGTCGAT GAAACTCAGC
GAGCTGTTCC CGTCCTGA
 
Protein sequence
MTSVADAVKK MQEKFNPSAA AGLDLVFGFN ITDEDKHYAL IVKDGTCDLQ EGENPDANCT 
LVMDAETLKG IVSGETDGMQ AFMGGKLRVE GDMMLSMKLS ELFPS