| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1882 |
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| Symbol | |
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| ID | 5194503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2156238 |
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| End bp | 2157077 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586346 |
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| Product | ABC transporter related |
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| Protein accession | YP_001267214 |
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| Protein GI | 148547112 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.573524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAG TCAAACTCAA TGTTGAATCG CTCAATGTGC GCTTCGTCAA CGGCAAGAAA
GTGATGCACG CGGTGCGTGA TGTGTCCTTC ACCCTGGGCC GGGAAAAGCT CGCCATCGTG
GGTGAGTCCG GTTCGGGCAA GTCCACTGTG GGCCGCAGCT TGCTCAAGCT GCACCCCGGC
AGCGCGCAGA TCACCGCAAA GGCCCTGCAG TTCGGCGATG TCGACCTGCT CAGTGCCAGC
GAAAAGACCA TGCAGAAAAT TCGCGGCCAG CGCATCTCGA TGATCATGCA AGACCCCAAG
TATTCGCTCA ACCCGGTGGT GCGGGTGGGT GACCAGATTG CCGAGGCGTA CCTGGCGCAC
CACAAGGCCA GCCGCAACGA CGCCCGTGAG CGGGTGCTGC AGATGCTCGA CAAGGTGCAT
ATCCGCGACC CGAAGCGCGT CTACGATCTT TATCCGCATG AGGTGAGCGG CGGCATGGGC
CAGCGCATCA TGATCGCGAT GATGGTCATC ACCAGCCCGG AAGTGATCAT CGCTGACGAG
CCGACCTCGG CGCTGGATGT TTCGGTGCGC CAGCAGGTGC TCAACGTGCT CGAAGAGCTG
GTGGTGGAGC AGCAGATGGG GCTGATCTTC GTTAGCCACG ACCTGAACCT GGTGCGCAAT
TACTGTGACC GGGTGCTGGT GATGTACGCC GGGCGCGTGG TGGAGTCGCT GGCTGCCAGT
GACCTGCACC GTGCCGAACA CCCCTACACC CGAGGCCTGC TGGCCGCTTT GCCAAGCATG
GACAACCGCC GCCCGCGTTT GCCCGTGTTG CAACGCGACC CACTGTGGCT CTCCTGCTGA
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| Protein sequence | MSAVKLNVES LNVRFVNGKK VMHAVRDVSF TLGREKLAIV GESGSGKSTV GRSLLKLHPG
SAQITAKALQ FGDVDLLSAS EKTMQKIRGQ RISMIMQDPK YSLNPVVRVG DQIAEAYLAH
HKASRNDARE RVLQMLDKVH IRDPKRVYDL YPHEVSGGMG QRIMIAMMVI TSPEVIIADE
PTSALDVSVR QQVLNVLEEL VVEQQMGLIF VSHDLNLVRN YCDRVLVMYA GRVVESLAAS
DLHRAEHPYT RGLLAALPSM DNRRPRLPVL QRDPLWLSC
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