| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1858 |
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| Symbol | |
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| ID | 5192918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2130002 |
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| End bp | 2130688 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640586324 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001267192 |
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| Protein GI | 148547090 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0263508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC CACACACTGA AGTCCTGACC CCGCTCAACA GCCAACTGAT CTTCATCGAT
CAGCAACCGC AAATGGCTTT TGGCGTGCAG AGCATTGACC GGCAGACGCT GAAGAACAAC
ACCGTGGGCC TGGCCAAAGC AGCCAAGATC TTTAATGTTC CCACCATCTT CACCACAGTC
GAAACCGAGA GCTTCTCCGG GCATACCTAC CCCGAGCTGC TCGCGGTCTT CCCTGACGCT
CCGCTGCTCG AGCGCACGTC CATGAACTCC TGGGACGACC AAAAGGTACG TGACGCGCTG
AAGAAGAATG GTCGAAACAA GATCATCGTT TCGGGCCTGT GGACTGAGGT CTGCAACACC
ACCTTCGCGC TGTCCGCCAT GCACGATGCA GGCTATGAGA TCTATATGGT TGCCGACGCT
TCCGGGGGCA CGACCAAGGA GGCTCACGAC TACGCCATGC AGCGCATGAT CCAGGCGGGC
GTGGTACCAG TTACCTGGCA GCAGGTGCTA CTGGAGTGGC AGCGCGACTG GAAAAACCGC
AACACCTACG ATGCGGTCAT GGAACTGGTC AAAGAGCATT CGGGTGCCTA CGGCATGGGC
GTCGACTATG CCTACACCAT GGTGCACAAA GCGCCAGAGC GCGTTCAACA CGGCCCAACC
CTGGCCCCCG TGCCCGCATC GGTCTGA
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| Protein sequence | MSKPHTEVLT PLNSQLIFID QQPQMAFGVQ SIDRQTLKNN TVGLAKAAKI FNVPTIFTTV
ETESFSGHTY PELLAVFPDA PLLERTSMNS WDDQKVRDAL KKNGRNKIIV SGLWTEVCNT
TFALSAMHDA GYEIYMVADA SGGTTKEAHD YAMQRMIQAG VVPVTWQQVL LEWQRDWKNR
NTYDAVMELV KEHSGAYGMG VDYAYTMVHK APERVQHGPT LAPVPASV
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