Gene Pput_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1839 
Symbol 
ID5194376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2110312 
End bp2110671 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID640586307 
Productsulfur relay protein TusC 
Protein accessionYP_001267176 
Protein GI148547074 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03010] sulfur relay protein TusC/DsrF 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000201161 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAAGT CTTTGTTGAT CATCAGCCGT CAGGCACCGT GGAATGGCCC CTCTGCCCGC 
GAGGCGCTGG ACATCGCCCT GGCCGGCGGC GCGTTCGACC TGCCGTTGGG CATGCTGTTC
CTCGACGATG GTGTGTTCCA GCTCGCGCCG GACCAGCAAC CCACCGCCGT GCAACAGAAG
AACCTGGCCG CCAACCTGCA GGCGCTGCCG ATGTTCGGTG TCGAAGAACT GTTCGCCTGC
AACCACAGCC TGGCCCGCCG CGGCCTGGCA GCCGAGACCC TGGCGCTGCC GGTGCAAGTG
CTCGATGACG CAGCGCTGAC CGCGCTGATA GCCCGTTTCG ACCAGGTGAT AACGCTCTGA
 
Protein sequence
MAKSLLIISR QAPWNGPSAR EALDIALAGG AFDLPLGMLF LDDGVFQLAP DQQPTAVQQK 
NLAANLQALP MFGVEELFAC NHSLARRGLA AETLALPVQV LDDAALTALI ARFDQVITL