| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1831 |
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| Symbol | |
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| ID | 5195299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2103127 |
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| End bp | 2104452 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586299 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001267168 |
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| Protein GI | 148547066 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.272086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00967825 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCTGT TTCGAAGCGA ACCTGTCGCC CAGCCCCTGG CCGCCCGTCT GCGCCCGTCC
AGCCTGGATG AGTACGTCGG CCAGGAGCAC CTGCTGGCGC GCGGTAAACC GCTGCGCGAA
GCGCTGGAAC AAGGTGCGCT GCACTCGATG ATCTTCTGGG GGCCGCCCGG GGTCGGCAAG
ACCACGCTGG CGCGGTTGCT GGCGCAGTTC TGCGATGCGC ACTTCGAAAC GGTGTCGGCG
GTGCTGGCCG GGGTGAAAGA GATTCGCCAG GCGGTGGAGG TGGCCAAACA GCAGGCTGGC
CAATATGGCC GTCGCACCAT CCTGTTCGTT GACGAGGTGC ACCGCTTCAA CAAGTCGCAG
CAGGACGCGT TTTTGCCCTA TGTCGAGGAC GGCACCCTGC TGTTCATCGG TGCCACCACC
GAAAACCCGT CGTTCGAGCT GAACAACGCG CTGCTGTCGC GGGCGCGGGT GTATGTGCTC
AAGAGCCTGG ACGAAGCGGC CCTGCGCAAG CTGGTCAACC GTGCGCTGAC GGAAGCGCGT
GGCCTGGGCA AGCGCAACCT GCGGGTGGGC GACGACGCCT TCAAGATGCT GATGGCCGCC
GCCGACGGCG ATGGCCGGCG CATGCTCAAC TTCCTTGAGA ACGCCTCGGA CCTGGCTGAA
GACGGCAGCG AGATCGACGT CGAGATGCTA CAGAGCCTGC TGGGTGACAG TCGCCGCCGC
TTCGACAAGG GCGGCGAGGC GTTTTACGAC CAGATATCCG CGCTGCACAA GTCGGTGCGC
GGCTCCAACC CCGATGGCGC CCTGTACTGG TTTGCACGTA TGCTCGACGG CGGCTGCGAT
CCGTTGTACA TCGCCCGCCG CGTGGTGCGC ATGGCCAGCG AAGACATCGG CAACGCCGAC
CCGCGTGCGC TTAGCCTGTG CCTGGCAGCC TGGGATGTGC AGGAGCGCCT TGGCAGCCCC
GAGGGCGAGT TGGCGGTGGC ACAGGCCATC ACCTACCTGG CCTGTGCACC CAAGAGCAAC
GCGGTGTACG TGGGGTTCAA GACCGCCCTG CGCGAAGCGG CCGAGCATGG TTCGCTGGAG
GTGCCGTTGC ACCTGCGCAA TGCCCCGACC AAGCTGATGA AGCAGTTGGG CTATGGCGAC
GAGTACCGCT ATGCCCACGA TGAACCTGAC GCCTACGCCG CCGGTGAGGA TTACTTCCCC
GACGAGCTGG AACCGCGCCA GTACTATCAG CCGGTGCCCC GTGGCCTGGA ACTGAAAATT
GGCGAGAAGC TGCGCCATCT GGCCGACCTC GACCGCAACA GCCCCCGCCA GCGGAGAAAA
CCGTGA
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| Protein sequence | MDLFRSEPVA QPLAARLRPS SLDEYVGQEH LLARGKPLRE ALEQGALHSM IFWGPPGVGK
TTLARLLAQF CDAHFETVSA VLAGVKEIRQ AVEVAKQQAG QYGRRTILFV DEVHRFNKSQ
QDAFLPYVED GTLLFIGATT ENPSFELNNA LLSRARVYVL KSLDEAALRK LVNRALTEAR
GLGKRNLRVG DDAFKMLMAA ADGDGRRMLN FLENASDLAE DGSEIDVEML QSLLGDSRRR
FDKGGEAFYD QISALHKSVR GSNPDGALYW FARMLDGGCD PLYIARRVVR MASEDIGNAD
PRALSLCLAA WDVQERLGSP EGELAVAQAI TYLACAPKSN AVYVGFKTAL REAAEHGSLE
VPLHLRNAPT KLMKQLGYGD EYRYAHDEPD AYAAGEDYFP DELEPRQYYQ PVPRGLELKI
GEKLRHLADL DRNSPRQRRK P
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