| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1825 |
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| Symbol | |
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| ID | 5194699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2095405 |
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| End bp | 2097675 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586293 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001267162 |
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| Protein GI | 148547060 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0620504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACC GCGAGCTCGA AGTCACCCTC AATCTTGCCT TCAAGGAGGC CCGTTCGAAG
CGTCATGAGT TCATGACCGT CGAGCATCTG CTGCTGGCAC TCCTTGACAA TGAGGCTGCC
GCGACCGTTC TGCGCGCCTG TGGCGCCAAT CTCGACAAGC TCAAGCATGA CCTGCAAGAG
TTCATCGACT CCACCACGCC GTTGATCCCT GTCAACGACG AAGACCGTGA AACCCAGCCA
ACCCTGGGCT TCCAGCGCGT GCTGCAGCGT GCCGTGTTCC ACGTGCAAAG CTCTGGCAAG
CGCGAAGTGA CCGGCGCCAA CGTGCTGGTG GCGATCTTCA GCGAACAGGA AAGCCAGGCC
GTGTTCCTGC TCAAGCAGCA GAGCGTGGCC CGTATCGACG TGGTCAACTA CATCGCCCAT
GGCATCTCCA AGGTGCCAGG GCATGGTGCG CAATCTGAAA GCGACCAGGA CATGCAGGAC
GAAGAGGGCG GCGAAACCTC CTCTTCGAGT AACCCGCTGG ACGCCTACGC CAGCAATTTG
AACGAGCTGG CCCGTGCCGG CCGTATCGAC CCGCTGGTCG GTCGCGAGCA GGAAGTGGAA
CGCGTGGCGC AAATCCTGGC CCGTCGGCGC AAGAACAACC CGCTGCTGGT GGGTGAGGCT
GGCGTGGGCA AGACGGCCAT CGCCGAAGGT CTGGCCAAGC GCATCGTCGA TGGTCAGGTG
CCTGACCTGC TGGCGCAGAG CGTGGTGTAC TCCCTCGATC TGGGCGCTTT GCTGGCCGGT
ACCAAATACC GTGGTGACTT CGAGAAGCGC TTCAAGGCGC TGCTCGGTGA GCTGCGCAAG
CGTCCGCAGG CCATCCTGTT CATCGACGAA ATTCACACCA TCATCGGTGC CGGTGCGGCG
TCGGGCGGGG TGATGGATGC CTCCAACCTG CTCAAGCCGC TGCTGTCATC GGGTGAAATC
CGCTGCATCG GTTCGACCAC GTTCCAGGAG TTTCGCGGCA TCTTCGAGAA GGATCGTGCC
CTGGCGCGTC GCTTCCAGAA GGTGGACGTC AGCGAGCCAT CGGTCGAAGA CACCGTGGGC
ATTCTGCGCG GCCTGAAAGG GCGTTTCGAA AGCCACCACA ACATCGAGTA CAGCGACGAA
GCCTTGCGCG CCGCCGCCGA ACTGGCTTCG CGCTACATCA ACGACCGGCA CATGCCTGAC
AAGGCCATTG ATGTGATCGA CGAGGCTGGG GCCTACCAGC GCCTGCAGCC AGAGGCCAAT
CGCGTCAAGC GCATCGATGT GCCGCAAGTG GAGGACATCG TCGCAAAGAT TGCGCGAATT
CCGCCGAAGC ACGTCACCAG TTCCGACAAG GAGCTGCTGC GTAACCTTGA GCGCGACCTG
AAACTGACCG TGTTTGGCCA AGACCAGGCA ATCGACTCGC TGGCCACCGC GATCAAGCTG
TCCCGTGCAG GCCTCAAGTC GCCAGACAAG CCGGTGGGTT CGTTCCTATT CGCTGGCCCT
ACCGGCGTCG GCAAGACCGA AGCGGCGCGG CAACTGGCCA AGGCGCTGGG TGTGGAGTTG
GTGCGTTTCG ACATGTCTGA GTACATGGAG CGTCACACCG TGTCGCGTTT GATTGGTGCG
CCGCCGGGTT ATGTTGGTTT TGACCAGGGT GGCTTGTTGA CCGAGGCGAT CACCAAACAG
CCGCACTGCG TATTGTTGCT CGATGAAATC GAGAAGGCCC ACCCGGAAGT CTTCAATCTG
CTGCTGCAGG TGATGGACCA CGGTACCTTG ACCGACAACA ACGGGCGCAA GGCCGACTTC
CGTAACGTGA TCCTGATCAT GACCACCAAC GCCGGTGCAG AAACCGCGGC GCGGGCGTCG
ATCGGCTTCA CTCATCAGGA CCACGCGTCC GATGCCATGG AAGTGATCCG CAAGAGCTTC
ACGCCAGAGT TCCGCAACCG TCTGGATACC ATCATCCAGT TTGGCCGCCT GAGCACGGAG
ACGATCAAAA GCATCGTCGA CAAGTTCCTT ATCGAATTGC AGGCGCAACT GGAAGACAAG
CGTGTGCTGC TGGAAGTCAG CGATGAAGCG CGCGGTTGGC TGGCGGTTTC GGGCTATGAC
GTGCAGATGG GTGCGCGGCC AATGGCGCGG CTGATCCAGG ACAAGATCAA GCGGCCGCTG
GCCGAGGAGA TCCTGTTTGG CGAGCTGGCC GAGCATGGTG GCGTGGTGCA TGTCGACCTG
CGCGATGGCG AACTGGTGTT CGACTTCGAA ACCACCGCTG AGGTCGCGTG A
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| Protein sequence | MLNRELEVTL NLAFKEARSK RHEFMTVEHL LLALLDNEAA ATVLRACGAN LDKLKHDLQE
FIDSTTPLIP VNDEDRETQP TLGFQRVLQR AVFHVQSSGK REVTGANVLV AIFSEQESQA
VFLLKQQSVA RIDVVNYIAH GISKVPGHGA QSESDQDMQD EEGGETSSSS NPLDAYASNL
NELARAGRID PLVGREQEVE RVAQILARRR KNNPLLVGEA GVGKTAIAEG LAKRIVDGQV
PDLLAQSVVY SLDLGALLAG TKYRGDFEKR FKALLGELRK RPQAILFIDE IHTIIGAGAA
SGGVMDASNL LKPLLSSGEI RCIGSTTFQE FRGIFEKDRA LARRFQKVDV SEPSVEDTVG
ILRGLKGRFE SHHNIEYSDE ALRAAAELAS RYINDRHMPD KAIDVIDEAG AYQRLQPEAN
RVKRIDVPQV EDIVAKIARI PPKHVTSSDK ELLRNLERDL KLTVFGQDQA IDSLATAIKL
SRAGLKSPDK PVGSFLFAGP TGVGKTEAAR QLAKALGVEL VRFDMSEYME RHTVSRLIGA
PPGYVGFDQG GLLTEAITKQ PHCVLLLDEI EKAHPEVFNL LLQVMDHGTL TDNNGRKADF
RNVILIMTTN AGAETAARAS IGFTHQDHAS DAMEVIRKSF TPEFRNRLDT IIQFGRLSTE
TIKSIVDKFL IELQAQLEDK RVLLEVSDEA RGWLAVSGYD VQMGARPMAR LIQDKIKRPL
AEEILFGELA EHGGVVHVDL RDGELVFDFE TTAEVA
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